Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3093 |
Symbol | |
ID | 4665484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3412195 |
End bp | 3413982 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824292 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_971431 |
Protein GI | 120611753 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00296366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.187641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCAGA CATCCCTCCC CAGCACCACC GCAGAGCAGT CCCCGGCCCT GCCCGTGCAC GGCGCGCATG GCAGCCGGCG GCTGCGCGTT CTGGTGGTCG GCACCCTGCT GCTGACGCTC ACGGTCACGT GGCTCCTGGT CGCCGTCTTG CTGAACACCA AATGGCAGGA CGCTGTGCGC TCCCAGGAGC GGCAGAACGC CAACCTGGCC CGGGTGCTGG AAGAGCAGAC GCTCCGCGTC CTGGCGGCCG CCGACCAGGC CACACTGCGC GTGGCGGCGG AAGTCCGCAG CGGCGAATTC AGCGAGCAGG ACTACGCGCT GTTCGCCAAC GAGACCGGGC TGGCACCCGA CATCCTCACC CAGTTGTCCA TCGTGGGCCC CGACGGCCGT TTCGTCGGCA GCAACCTCGA TCCCTCGGCG GCCCGCAACC AGGACACCGA CCTGAGCGAG CGCGAACATA TCCGGGTGCA CCTGGAGCCC GGCAAGGAAC CCAGGGCGCG GACGCGGATG TCCGCATCGG GACTGTTCGT CGGCAGGCCC GTGACCGGGC GGGTCTCCGG CCGCCGGACC ATGCAGTTGA GCCGGCCCAT CGTCGGCAGC AACCGCTACC TGCACGGCGT GGTGGTCGCC TCGCTCAATC CGGGCTACTT CGAGCAGGTG TACGGGAGCG TGGACATCGG CGCGCAGGGC GCGGTCGCGC TCATGGGCGC GGACTTCAAC GTGCTGGCCC GGGTGATCGG AGCCCAGGCG GAAAGCATCG ACAAGACCAT CGAATTCCCG CCAGGCCATC CCCTCACCGA CACCACCCGG ACGCAGGGCA CCTACCAGCG CGTCAGCCAT ATCGACGGAC TGGGCCGCAT CACCGCCTTC CATCGCGTGC CGGGGTATCC GCTGACCGTC CTCGTCTCCA CCACCGACGA CGAGGCCCTG GCGGAATGGA AGACCATGCG GACCTTCACC GTGGTGTTCG CCGGGCTTTT TTCCGCGACG CTGATCGCCC TCGGCGCGGG ATTCCTGCGG GGGCTGCACC AGCTGGAGCA GAAGAACCTG GCGCTAGCTG CGAGCGAGGC CCAGGCCCGT TCCGCCAACC GGGCCAAGAG CGAATTCCTG ACGGCCATCT CGCACGAACT GCGCACCCCC CTCACCAGCA TCCACGGGTT CGCCGAACTC ATGGAGCAGC GCCTGGAACA GCCGTCCTAC CGCGAGGCCG CCGGCCTCAT CCGCAGCGCG GCGGAACATC TCAACACGCT GCTGTCCGAG ATCCTGGATC TGGCCAAGGT CCAGGCCGGC GCCATGCCCA TCGTGCCCGG GGACCATGCC GTGCGCGAAC TCGTCGGCAC CACCGTCGAT CTCTTCGCCA TCTCGGCAGT GCAGAAAGGG CTCACGCTGG AAATGCACAT CGCTCCCGGC GTCCCGCAGG TACTGCGGTG CGACGGCCTG CGGCTGAAGC AGATCCTCAA CAACCTGCTG AGCAACGCGC TCAAGTTCAC GCGGGAGGGG GGCGTGCGAC TGGAGACGGA CACCGCCGAC GGCCACAGCG TGCGCTTCCG GGTCACCGAT ACCGGCCCCG GCATCCCCGC CGATCTGCAC GAGGTCATCT TCGAGAAATT CAGCCAGGGC AGCGCCGACG TGAGCACGCA GCACGGCGGC ACCGGCCTGG GACTGGCGCT CTCGCGCGGA CTGGCCGAGC TCATGGGCGG CCGCCTGACC GTGGCCTCGG AGCCGGGCCA GGGCGCCTGC TTCACGCTGG AGCTGCCGAT GCACCCGCCG GCCGCCGACG GGGCCTGA
|
Protein sequence | MHQTSLPSTT AEQSPALPVH GAHGSRRLRV LVVGTLLLTL TVTWLLVAVL LNTKWQDAVR SQERQNANLA RVLEEQTLRV LAAADQATLR VAAEVRSGEF SEQDYALFAN ETGLAPDILT QLSIVGPDGR FVGSNLDPSA ARNQDTDLSE REHIRVHLEP GKEPRARTRM SASGLFVGRP VTGRVSGRRT MQLSRPIVGS NRYLHGVVVA SLNPGYFEQV YGSVDIGAQG AVALMGADFN VLARVIGAQA ESIDKTIEFP PGHPLTDTTR TQGTYQRVSH IDGLGRITAF HRVPGYPLTV LVSTTDDEAL AEWKTMRTFT VVFAGLFSAT LIALGAGFLR GLHQLEQKNL ALAASEAQAR SANRAKSEFL TAISHELRTP LTSIHGFAEL MEQRLEQPSY REAAGLIRSA AEHLNTLLSE ILDLAKVQAG AMPIVPGDHA VRELVGTTVD LFAISAVQKG LTLEMHIAPG VPQVLRCDGL RLKQILNNLL SNALKFTREG GVRLETDTAD GHSVRFRVTD TGPGIPADLH EVIFEKFSQG SADVSTQHGG TGLGLALSRG LAELMGGRLT VASEPGQGAC FTLELPMHPP AADGA
|
| |