| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3080 |
|---|
| Symbol | |
|---|
| ID | 4665711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3395848 |
|---|
| End bp | 3396795 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639824279 |
|---|
| Product | putative adenylate/guanylate cyclase |
|---|
| Protein accession | YP_971418 |
|---|
| Protein GI | 120611740 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.17288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.300362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCG TCCGGCACAC CGTCGTGTTT TCCGACATCG TCGGCACCAC GGCGCTGTTC
GAGGCGCAGG GCAACACCCT GGCCACCACG GCGGTGACGG GGTTGACCGA ATGGATGGCG
GCCGCGCTCG GCCACCATGG CGGCCGGGTG GTGAAGACGC TGGGCGACGG CGTGCTGGCC
GTGTTCGGCG AGCCAGCCTC CGCCGTCACC GCGGTGGCGG ACATGGCCCG GCGCCACCAC
GAGCGGCCCG GCAAGCCGGA TGGCGTGATG GACCTGCGCG TCGGCATGGC CTACGGCGAG
CTGGTGGAGG TGGACGGGGA TACCTATGGC GATGCGGTGA ACATCGCCTC CCGCCTGTGC
GAGCGCGCCG GCGCCCGCGA GATCCTCGCC GATGCCGCCA CCGTGGAACT GGCGGGCAGC
GTGGACGGCG CGGGCTACGT GCGCATGGGC GCGCTGGAAC TGCGCGGCCG GGCCGAGCCG
TTGCTGGTGT ACCAGGTGGA CTGGCGGGTG GGCGAGGAGC ACGGCCCGTT GACGCAGCGC
GCCGGCCTGG CGAGCGAGCT GGCGCCGATC CAGCAGCCCA ACACCTGGAT CGAGCTGGCC
TGGTCCGGCT CCATCCGCAC CTTCGGCGCG GCGGACAGCC CGCTGCACGT GGGCCGGGGC
TCGCAGGCGC CGGTCCGGGT CGCCGATCCG CGCGTGTCGC GCCTGCACGC GCGCATCGAA
TGGCGCGGCG GCACCGTGGT GTTCACCGAC CTCAGCAGCT ACGGCAGCTG GGTGCGGTTC
GACGGCAGCG AAACCGTCGT GGCGCTGCGC CGCTCCGCCT GCCTGCTGCA TGGCAGCGGG
CAGATCGCGC TCGGCGTGCC TTTCGGCCGC ACGGACACGC CCACGCTGGG GTTCGGCGTC
ACCGACACCG AGCTGCCGGA AACCTGGGAC ACGCTCCCTC CTTACTGA
|
|---|
| Protein sequence | MRTVRHTVVF SDIVGTTALF EAQGNTLATT AVTGLTEWMA AALGHHGGRV VKTLGDGVLA
VFGEPASAVT AVADMARRHH ERPGKPDGVM DLRVGMAYGE LVEVDGDTYG DAVNIASRLC
ERAGAREILA DAATVELAGS VDGAGYVRMG ALELRGRAEP LLVYQVDWRV GEEHGPLTQR
AGLASELAPI QQPNTWIELA WSGSIRTFGA ADSPLHVGRG SQAPVRVADP RVSRLHARIE
WRGGTVVFTD LSSYGSWVRF DGSETVVALR RSACLLHGSG QIALGVPFGR TDTPTLGFGV
TDTELPETWD TLPPY
|
|---|
| |