| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3067 |
|---|
| Symbol | |
|---|
| ID | 4668213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3380772 |
|---|
| End bp | 3381671 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639824268 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_971407 |
|---|
| Protein GI | 120611729 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.119732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.199028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCA AGCCTCTCGA ACCACGGCCG GCTGCATGCG CCGTGGAAGG ACCCCGATAC
GTGCGCGTCC TGTCCATCGC CGGGTCCGAC AGCGGAGGCG GGGCGGGCAT CCAGGCCGAC
CTGAAGACCT TCGCCGCCCT GGGCTGCTAC GGAATGACCG CCATCACGGC CATCACCGCC
CAGAACACGC AGGGCGTACG CTCCATCCAC GGAGTGCCCG CCGCCATCCT GGGCGACCAG
ATCGACGCGG TGGTGGAAGA CATCGGCGTG GATGCCGTCA AGATCGGCAT GCTGCATGCT
CCGGAGGTCG CCGAGGTGGT GGCCGACGCG ATCCGCCGGC ACGCGCTGCC CCACGTGGTG
CTCGACCCCG TCATGGTGGC CACCAGCGGC GATCGCCTCA TCGCGCCGGA CACCGTGCGC
GTGCTGGTGA AGGCGCTGTT TCCGCTGGCT GCGGTGGTGA CGCCGAACCT CGACGAGGCG
GGCATGCTGC TGGGCCGCGC CATCCAGGAC GAGAGCGCCA TGGACGCCGC GGCGCGGGAG
CTGCTGGGCC TCGGCGCCCA GGCCGTGCTG CTCAAGGGCG GCCACCTGCC GGGCGACGCG
CTGGTGGATG TCCTGGCCGT GCGGGGCGTG GCGCAGCACC TGCGCCTGCG GTCCGCGCGC
ATCCCGACGC GCAACGGCCA TGGCACGGGC TGCACGCTGT CGTCCGCGAT CGCCGCCCAC
CTGGCCCTGG GCAGCGGACT GCGCGAAGCT GTGGCCGCCG CGCATGCCTA CGTCCAGGCG
GCGATCGCCG CCGGGGCACC GGTGCGCACG GGCCGCGGCG CAGGTCCGCT CGACCATGGG
CATGCGCCCG TGGCGCAGCG CATCCACCGC GACCCGGCCG CGACCGGGGG ATCCCTGTGA
|
|---|
| Protein sequence | MNSKPLEPRP AACAVEGPRY VRVLSIAGSD SGGGAGIQAD LKTFAALGCY GMTAITAITA
QNTQGVRSIH GVPAAILGDQ IDAVVEDIGV DAVKIGMLHA PEVAEVVADA IRRHALPHVV
LDPVMVATSG DRLIAPDTVR VLVKALFPLA AVVTPNLDEA GMLLGRAIQD ESAMDAAARE
LLGLGAQAVL LKGGHLPGDA LVDVLAVRGV AQHLRLRSAR IPTRNGHGTG CTLSSAIAAH
LALGSGLREA VAAAHAYVQA AIAAGAPVRT GRGAGPLDHG HAPVAQRIHR DPAATGGSL
|
|---|
| |