| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3065 |
|---|
| Symbol | |
|---|
| ID | 4668264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3375980 |
|---|
| End bp | 3376777 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639824266 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971405 |
|---|
| Protein GI | 120611727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0560449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0755351 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCA TTCAGCAGCA GCCCGGCGAT CCCTTGCTGG AATTCCGGCT GGCCTATCTG
CGTGCCATCG CCAAGTCCTG GTACGAACCC GAATACCGCG ACACCCTGCT CAGGCAAAAG
GACATCCAGC CCCTGCTCGC CAAGGACTTC GGCATGACGA CCCAGTGGCC CTGGCTGGAC
GTGGCGCTCC TTCGCAGCGA CAACCCGCTC GACCAGACCT TGTGGAAGCC CGAACTGACC
GCCGGCTGGA TCGGCCTGGA CGATGCCTTC GAGATCGTCT TCCCCGAAGC GCCCGCCGAC
CGCGCCGCCG AGGCGCTGGC CAGCTATTAC CAGCTGTTCC CCACGCTCAT GGGCGCGACC
GCCGACGCCC GCGACGAGGA GCACGTGCCG CCGGGCATGG TGGGCGGCGC GCTGCCCACG
GGCCTGGGCA TCCCGGGCGG GGACCCCGGC TCCCTGCTGG CCTTCGGCGG CGTGGTGCTG
CGGGCCATCG CGCTCGCCTG GCAGTCGAAG GAGTTCCGCG ACGAGCTGCT GAACCCCGGC
TGTGCCGATG CGGCGCCGCT GTTGAGCCAA TGGCTGGGCT ACAACAACCC CTTCAACTTC
TCCATCCGGT TCACGCCCAA CAAGTCGCTG ACCTGGGATG CCGGCAAGGG TTGCTGGAAC
CAGCTCAATC CGGACGGCAG CAAGATCAAG AACCGCATCG TGCTGAACTA TCCCAACGCG
CCCGAGGCCC GGGATTTCTG GCCGATCTCG CTCACGTCGT ACAACAACAC CGGCAGCGCC
TATCCGTTCA CCTGCTGA
|
|---|
| Protein sequence | MSSIQQQPGD PLLEFRLAYL RAIAKSWYEP EYRDTLLRQK DIQPLLAKDF GMTTQWPWLD
VALLRSDNPL DQTLWKPELT AGWIGLDDAF EIVFPEAPAD RAAEALASYY QLFPTLMGAT
ADARDEEHVP PGMVGGALPT GLGIPGGDPG SLLAFGGVVL RAIALAWQSK EFRDELLNPG
CADAAPLLSQ WLGYNNPFNF SIRFTPNKSL TWDAGKGCWN QLNPDGSKIK NRIVLNYPNA
PEARDFWPIS LTSYNNTGSA YPFTC
|
|---|
| |