Gene Aave_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3052 
Symbol 
ID4669615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3361845 
End bp3362648 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content72% 
IMG OID639824253 
Producthypothetical protein 
Protein accessionYP_971392 
Protein GI120611714 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.291643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0745298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACC TGGCGTTCGT TTTCGCGGGA TTCGCGGTGG GCCTGATCGT CGGCCTCACC 
GGGGTCGGTG GCGGCTCCCT GATGACGCCC GTTCTGATCT TCTTTTTCGG CGTCAAGCCC
CACCTGGCCA TCGGCACGGA CCTGCTGTTC GCCGCGTTCA CCAAGATGGG CGGCACCGTG
AGCCTGGCCC GCCAGCGCCT CGTGCCCTGG CGCGTGGTGG CCCTGCTGTG CGCGGGCAGC
ATCCCCTCGG CCCTGCTGGC CCTCTGGGCG CTGCGCACCA TCGGCCCGGC CAGCGGCACC
GCGCAGCACC TGATGACCAC CACCCTGGGC GGCGCCCTGC TGCTCACGGC CGCCGCCACG
CTGTACAAGG CCTTCGTCTT CTCCCCGGCC CGCCAGGCCG CCGAACGCGC CGCCCGCCAG
AGCGGGGGCG AACAGGCCGA CCGCCCCCGC CACTGGAGCC TGCCCGTGCT GCTGGGCGCG
CTGATCGGCA CCCTGGTCAC CTTCACGTCC GTGGGTGCCG GCGCGATCGG CGTCACCGTG
CTGCTGATGG TGTTCCCCCT GCTGCCGCTG CCGCGGGTGA TCGCCGCGGA CATCGCCTAT
GCCGTGCCGC TGACGCTGGT GGCGGGCCTG GGCCATGCCA GCCTCGGCTC CGTGGATTGG
CCGCTTCTCG CACAATTGCT GGCCGGCTCC CTGCCGGGCA TCTGGCTGGG CTCGCGGCTC
GTCTCCCGCG CGCCGGAGCG GTTCATCCGC TCGGCCCTTT CCGTGCTGCT CGCCTGGGCG
GGCGCCAAAC TGGTTCTGAT CTGA
 
Protein sequence
MHDLAFVFAG FAVGLIVGLT GVGGGSLMTP VLIFFFGVKP HLAIGTDLLF AAFTKMGGTV 
SLARQRLVPW RVVALLCAGS IPSALLALWA LRTIGPASGT AQHLMTTTLG GALLLTAAAT
LYKAFVFSPA RQAAERAARQ SGGEQADRPR HWSLPVLLGA LIGTLVTFTS VGAGAIGVTV
LLMVFPLLPL PRVIAADIAY AVPLTLVAGL GHASLGSVDW PLLAQLLAGS LPGIWLGSRL
VSRAPERFIR SALSVLLAWA GAKLVLI