| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3045 |
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| Symbol | |
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| ID | 4668307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3354404 |
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| End bp | 3355393 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639824247 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_971386 |
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| Protein GI | 120611708 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.209932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.043274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCGC TGTTCGAATC CCCCGCGCGC ACCGCACCAT CCACCTCCCG CCGCCGCTGG
CTGGCTGCCG GCGCGGGCGC TGCCGCCCTG GCCGCGCTGC CGGCCTGGTC GCAGTCTGCC
GGTGCCGCGC GCACGCTGCG GGTGGGGCAC CAGAAGGGGT GGCTCTCCCT GCTGAAGGCG
CGCGGCACGC TGGAGAAGCG CCTCGCGGCC GTCGGCGTGA AGGTGACCTG GACGGAATTC
AATGCCGGCC CGGTGCAACT GGAGGCGCTG AACGTCGGCT CCATCGATTT CGGCGACGTG
GGCGAGGCCC CGCCGATCTT CGCCCAGGCC GCGCGCGCGC CGCTCGTGTA TGCCGGCGCC
ACGGTGCCGC GCCCGGCGCT GGAGGCCGTG GTGGTGCCCA AGGACTCGGC CATCCGCAGC
GTGGCCGACC TGAAGGGCAA GCGCGTGGCC TACAACAAGG GCTCCAACGT GCACTATTTC
CTGGCGAAAC TGCTGGAGAA GAACGGCCTG CAGTACCGCG ACGTGCAGTC CGTGTTCCTG
GCGCCGCCGG ACGCGCGCGC CGCGTTCGAG CGCGGCGCCG TGGATGCCTG GGTGATCTGG
GACCCGTTCC TCGCGGCGGC GCAGAAGGCG CTGGACGCCC GCATCCTGGC CGACGCCACG
GGCGTGGTGA ACAACCGGGC CTTCTACTTC ACCTCGCGCG ACTTCGCCAG CCGCAACGCG
GACGTGCTGC GCATCGCGAT CGAGGAAGTG GACGGCATCG ACCAATGGGT TTCGGGCCAC
AAGGCCGAAG CCGCCGCGGA ACTGTCCCAG GTGCTGGGCC TGGACCTTGC GGTGACCGAA
CTCTTCGTCG GCCGCGTGGG CTACGGCACG CGGGCCGTGA CCCGCGAGAT CCTGGCCGAG
CAGCAGGCCA TCGCGGACAC CTTCTTCGCC CTCAAGCTGA TACCGAAAAA GCTCGACGTG
CTCCAGGCCG CGCCGGTGGA GCTGCTGTAG
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| Protein sequence | MVPLFESPAR TAPSTSRRRW LAAGAGAAAL AALPAWSQSA GAARTLRVGH QKGWLSLLKA
RGTLEKRLAA VGVKVTWTEF NAGPVQLEAL NVGSIDFGDV GEAPPIFAQA ARAPLVYAGA
TVPRPALEAV VVPKDSAIRS VADLKGKRVA YNKGSNVHYF LAKLLEKNGL QYRDVQSVFL
APPDARAAFE RGAVDAWVIW DPFLAAAQKA LDARILADAT GVVNNRAFYF TSRDFASRNA
DVLRIAIEEV DGIDQWVSGH KAEAAAELSQ VLGLDLAVTE LFVGRVGYGT RAVTREILAE
QQAIADTFFA LKLIPKKLDV LQAAPVELL
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