Gene Aave_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3032 
Symbol 
ID4666761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3340692 
End bp3341699 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content74% 
IMG OID639824234 
Productglutamate--tRNA ligase 
Protein accessionYP_971373 
Protein GI120611695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.490403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.333291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCT CCCCGGCCGC ATCCACGCAA GCCCCGGCCG CGGGCCGACG CTATGTAGGC 
CGCTTCGCGC CCTCGCCCAC CGGCCCGCTG CATGCGGGCT CGCTGGTGGC CGCGCTGGCC
AGTTGGCTGG ACGCGCGCTC CGCGGACGAT GGCCGCGGCG GCATCTGGCT GGTGCGCATC
GAAGACGTGG ACACGCCACG CTGCCAGCCC GGCGCGGCGG AGACGATTCT GCGGCAGCTC
GCGGACTGCG GCCTCGTGCC GGACGGCACG GTGTGGTGGC AGTCGGCACG CCACGCGCGG
TATGCCGAGC AGCTGGAGCA TCTGGCGCAC GCAGGGCTGG CCTACCCGTG CGCCTGCACC
CGCGCGGACA TCGAGCGCGC CCATCGGCTG CACCACGGCG CGCGCGACCG CCATTCGGAG
CTGCCCTATC CGGGCACCTG CCGCAACGGC CTGGGCGGGC GCCCGCCCCG GTCCTGGCGG
TTTCGCACGT CGGAATACCA GAAGAAATTT GCCCCGCAGG CCGCCGCGCA GGCGCAGGAC
CGCCCCGCCA TCCATGCGGG CGGCGTGGCC TGGACCGACC GGCGCCTGGG ACCGCGCACG
CAGGACGTGG CGGAGGTGGT GGGCGACTTC GTGCTGCGCC GCGCGGACGG CCTCTGGGCT
TACCAGCTCG CCGTGGTGGT GGACGATGCC GACCAGGGAG TGACGCACGT GGTCCGCGGG
GAAGACCTGC TGGACAACAC GCCCAGGCAG ATTCTTCTGC GGCACGCCCT CGGGGCCGGG
GCCCCCTCCT ACCTGCACAC GCCCCTGGTG CGCGCACCGG ACGGAGAGAA ACTCTCCAAA
CAGCACGGCG CGCCGGCGGT GGACACCTCG AACCCTCTGG CGGCGCTCCG CGCAGCGGCC
GGCGCGCTGG GGCTGCCGCC TCTGCAGCAT CCGCACGACA CCACCGTCGG CGAGGCGCTG
GCGTGGTGGG CGCAGGCATG GCCGCGAATC TACAATCGGC CATCGTGA
 
Protein sequence
MSVSPAASTQ APAAGRRYVG RFAPSPTGPL HAGSLVAALA SWLDARSADD GRGGIWLVRI 
EDVDTPRCQP GAAETILRQL ADCGLVPDGT VWWQSARHAR YAEQLEHLAH AGLAYPCACT
RADIERAHRL HHGARDRHSE LPYPGTCRNG LGGRPPRSWR FRTSEYQKKF APQAAAQAQD
RPAIHAGGVA WTDRRLGPRT QDVAEVVGDF VLRRADGLWA YQLAVVVDDA DQGVTHVVRG
EDLLDNTPRQ ILLRHALGAG APSYLHTPLV RAPDGEKLSK QHGAPAVDTS NPLAALRAAA
GALGLPPLQH PHDTTVGEAL AWWAQAWPRI YNRPS