| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3024 |
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| Symbol | |
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| ID | 4665808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3333607 |
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| End bp | 3334389 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639824226 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_971365 |
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| Protein GI | 120611687 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.207783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTTGCATT TTGTGTCTGA CTCCGCGACC CCCCCACTTG TGGACCTGCG CGACCTGCGC
CTGACGACGG CGCACGCCCT GGTCGCGCAG GCGCTGGGCT CCGAAGCCGC CATCCCCAGG
GAATCGCCCC GGCATTACCT GCAGGGCCTG ATCGACGGCC TCTGCGAGCT TTCGTTGAAG
GACCCGCTCA CGGGCCTGGC GAACCGGCGG CATTTCCGGA CCGTGCTCGA GCGCGAGATC
GACCGCGTCA CGCGCGCGGG CGAGGCTGCG CTGCTGCTGA TGCTCGACAT CGACAACTTC
AAGCGGGTCA ACGACACCCA CGGCCACATG GCCGGCGACA TCGTCCTGCA GTCGATCGCG
CGCACCCTGA GCCGCTGCGT CCGGCCCATG GACACCCTGT CGCGCTACGG CGGCGAGGAA
TTCGCCGTGG TCCTGCCCGC CTGCCAGGCC GGTTTCGGCA AGGTGGTGGC AGAGCGCATC
CGCCGCGCGG TGGAGCGCAC CCCCGTCCGC ATCTCGCCGA CGGTCGAACT CAACGTCACC
GTCAGCATCG GCGGCGCGTT CGCGCTCCAG TGGATCCGCA GCACCACGCT GCTGTGGACG
GAGCGCGCGG ACAGCCAGCT CTACAAGGCC AAGCTGGCTG GACGCAACCG GGTCAGCATC
GAAGAACAGC CGGACAGCAC GGTGAGCGCC GAAGAGAAGA GTTTGCTTTT CGGCCCGCTG
TACACTCCCT CGGGTTGGGG CGACGTTCCC CCTCCCTTGG ATTCCACAGG CAGCGCCTAT
TGA
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| Protein sequence | MLHFVSDSAT PPLVDLRDLR LTTAHALVAQ ALGSEAAIPR ESPRHYLQGL IDGLCELSLK
DPLTGLANRR HFRTVLEREI DRVTRAGEAA LLLMLDIDNF KRVNDTHGHM AGDIVLQSIA
RTLSRCVRPM DTLSRYGGEE FAVVLPACQA GFGKVVAERI RRAVERTPVR ISPTVELNVT
VSIGGAFALQ WIRSTTLLWT ERADSQLYKA KLAGRNRVSI EEQPDSTVSA EEKSLLFGPL
YTPSGWGDVP PPLDSTGSAY
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