| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3023 |
|---|
| Symbol | |
|---|
| ID | 4665798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3331838 |
|---|
| End bp | 3333562 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639824225 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_971364 |
|---|
| Protein GI | 120611686 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.524361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.25764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCG CCCCCTCCTC CGCGCCCTCC TCCGCGCCGC CGGAAGCCGG CACCTCCGGC
CGCCTGCGCC TGCTCCAGCG CTGGTTCCCT TTTCTCGCGT GGCCCCGGCC GGACGCCCAG
TTGCTGCGGG GAGAGTTCTG GGCCGGCATG ACCGTGGGGC TGATGCTGGT GCCCCAGGGC
GTGGCCTACG CGGCCCTGGC CGGCATGCCG CTGGTGACGG GGATCTACGC GTCGCTCGTG
CCCGCGTTGA TCGCGGTGCT GTGGAGTTCA TCCACCCGCC TGGGCGTGGG TCCCACGGCC
CTCACCGCCC TGCTGATCGG GGCCTCCCTC ACCGGCATGG CGGAACCGGG CAGCGCCGAA
TGGGTGGCCC TGGCGGCCTG GATGGCCATC CTGTCGGGAC TGGTGCAACT GCTGCTGGGC
GCGGTGCGCT TCGGCTGGCT GCTCAACCTC GTCACGTCGC CCGTGCTCAA CGGTTTCACC
CAGGCCGCCG CGCTGCTCAT CCTGGCGTCG CAATTGCCCG CGCTGCTGGG GCTGCGCACC
ACCTGGCACG CGGTGGCCAC CGCGCCGTCC ATACACCACT TCGACGGCAC GGCGGCGGCC
TTCGGGCTCG GCAGCCTGGC CCTGCTGACC CTGGCGCGCC GCTGGCGGCC CACCTTTCCC
TCGGCCATCG TCATCGTCGG CATCGCGGCC CTGGTCAGCC GGGCCCTGGG CTACGCCGAC
CAGGACGGCG CGGTGGTGGG CCACCTGCCT TCCGGGCTGC CGCACTTCTA CTGGCCGGGC
TGGCTGGAGT GGGACCAGTT CGGCCAGTTG CTGATGCCCG TGCTGGTGGT CACCCTCGTG
AGCTTCCTGG AGACCGCCTC CTCCGCCAAG GTCGAGCACC AGCAGGGCGG CACGCGCTGG
AACGAGAACC AGGACCTCAT CGCGCACGGT CTGGCGAAGA TGGGGTCGGG TTTCTGCGGC
AGTTTCGCGA CCAGCGCATC GTTCTCGCGC TCCGCGATCA ACCTGTACGC GGGCGCGAAA
AGCGGCTGGG CCACCCTGTT CGCGCTGGCG CTGGTCCTGG CGGTGCTGCT GTGGCTCATG
CCGGCGCTCT ACCACGTGCC GCAGTCGGTG CTGGCGGCGG TCGTGGTGGC GGCGGTCACC
AGCCTCATCA GGCCGGCGGT GCTGCTGCGG CTCTGGCGCA TTTCCCGGGT GGAGGCCCTC
ATCGGCGGGA TGACGTTCTT CCTCACGCTC GCGACCGCGC CGCGCATGTA CTGGGGAGTG
CTGGCGGGAC TGGTGCTGAA CCTGAGCCAT TTCCTCTACC AGCGGCTGCA TCCGCGCATC
ATCGAAGTCG GGCTGCACCC GGACGGCAGC CTGCGCGACC GCCACCTGTG GCAATTGCCG
CCGCTCGCGC CCGGTCTTCT GGGTGTGCGG ATGGACGCGG AACTGGATTT CGCGTCCGCT
GCTGCGCTGG AACAACGCAT TTCGGAAGAA CTTGCGGCAC ATTCCGAGGT GCGGCATATC
TGCCTGTTCG CGCTGCCGAT CAACCGCATC GACGTGACCG GCGTTGAGTG CTTCGGCCGG
CTGCGGGCCC TGGCCCGCTC CCACGGTGGC GCACTGCACG TGAGCGGCAT GAAACTTCCT
GTCGAGCAGG TGCTGCGCCG CGCGGGTTTG CTGGAGGGCC CGGGCCTGGT GCTCTACCGC
ACCGACGCCG AAGCCCTGCT GGCATTGCAA CGTTTACCTT TGTAG
|
|---|
| Protein sequence | MSSAPSSAPS SAPPEAGTSG RLRLLQRWFP FLAWPRPDAQ LLRGEFWAGM TVGLMLVPQG
VAYAALAGMP LVTGIYASLV PALIAVLWSS STRLGVGPTA LTALLIGASL TGMAEPGSAE
WVALAAWMAI LSGLVQLLLG AVRFGWLLNL VTSPVLNGFT QAAALLILAS QLPALLGLRT
TWHAVATAPS IHHFDGTAAA FGLGSLALLT LARRWRPTFP SAIVIVGIAA LVSRALGYAD
QDGAVVGHLP SGLPHFYWPG WLEWDQFGQL LMPVLVVTLV SFLETASSAK VEHQQGGTRW
NENQDLIAHG LAKMGSGFCG SFATSASFSR SAINLYAGAK SGWATLFALA LVLAVLLWLM
PALYHVPQSV LAAVVVAAVT SLIRPAVLLR LWRISRVEAL IGGMTFFLTL ATAPRMYWGV
LAGLVLNLSH FLYQRLHPRI IEVGLHPDGS LRDRHLWQLP PLAPGLLGVR MDAELDFASA
AALEQRISEE LAAHSEVRHI CLFALPINRI DVTGVECFGR LRALARSHGG ALHVSGMKLP
VEQVLRRAGL LEGPGLVLYR TDAEALLALQ RLPL
|
|---|
| |