Gene Aave_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3000 
Symbol 
ID4667325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3307695 
End bp3308759 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content72% 
IMG OID639824202 
Productferrochelatase 
Protein accessionYP_971341 
Protein GI120611663 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.434422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT CCGCCGCAGA CCGCTCCCCG ACCGCCCCGA TGCCCCGCAC CGCCGTGCTG 
CTGTGCAACC TGGGCACGCC CGATGCGCCC ACCGCGCCCG CGCTGCGCCG CTATCTCGCG
CAGTTCCTGT CCGACCCGCG CATCGTGGAG ATTCCCCGTG CCGCGTGGCT GCCCATCCTG
CACGGCATCA TCCTGCGCAT CCGGCCGGCG AAGTCCGCGG CCAAGTACGC CAGCATCTGG
ATGCCCGAGG GTTCGCCCCT GGCCGTGTGG ACGGAGCGCC AGGCCACGCT GCTGCGCGGA
TGGCTGGGCG AGGCGGGGCT GCGGGTGCAG GTGCGGCATG CGATGCGCTA CGGGCAGCCG
TCCATCGCCG GCCAGTTGAA GGCCCTGCAG GCCGAAGGCG TGGACCGCGT GCTGGTGCTG
CCGCTCTATC CGCAGTACTC GGGCACGACC ACCGCGAGCG TGTCGGACGA CGTGTGCGCC
TATGCGCTGC GCACGCGCCG CCTGCCGGAG CTGCGTTTCG TGAACAGCTA CCACGACCAC
CCCGCCTACA TCGACGCGCT GGCACGCAGC GTGCGCGCCC ACTGGCAGCG CGAGGGCGGG
CCGGCAGAAC AGCTGGTGAT GAGCTTCCAC GGCATTCCGG AGCGCGCCGT GCGCCTGGGC
GACCCCTACC AGCAGGAGTG CCTGGCGACC GCCGCGCTGC TGGCGCAGGC GCTGGGCCTG
GCGGCGGACC GCTACCGGGT GACCTTCCAG TCCCGCTTCG GCAAGGCCAA GTGGCTGGAG
CCCTATACCG AACCGACGCT CATCGAGATG GCCCGTGGCG GCACGCGCAG CGTGGACGTG
ATGTGCCCGG GGTTCACCAG CGACTGCCTG GAAACGCTGG AGGAAATCAA CCAGGAGGCG
CGCGAGGCCT TCCTGCACGC GGGCGGCAAG GAATTCCGCT ACATCCCCTG CCTGAACGCG
GACAACGCCT GGATCACCGC GCTGAGCCGG ATCGCGCAGG AGCACCTGTC GGGCTGGGAT
ACGGGGGCAC CGGGCGGAGC GGCAGCGCCC GGCCTGGCCC GCTGA
 
Protein sequence
MNASAADRSP TAPMPRTAVL LCNLGTPDAP TAPALRRYLA QFLSDPRIVE IPRAAWLPIL 
HGIILRIRPA KSAAKYASIW MPEGSPLAVW TERQATLLRG WLGEAGLRVQ VRHAMRYGQP
SIAGQLKALQ AEGVDRVLVL PLYPQYSGTT TASVSDDVCA YALRTRRLPE LRFVNSYHDH
PAYIDALARS VRAHWQREGG PAEQLVMSFH GIPERAVRLG DPYQQECLAT AALLAQALGL
AADRYRVTFQ SRFGKAKWLE PYTEPTLIEM ARGGTRSVDV MCPGFTSDCL ETLEEINQEA
REAFLHAGGK EFRYIPCLNA DNAWITALSR IAQEHLSGWD TGAPGGAAAP GLAR