Gene Aave_2993 details

Gene Information

• Locus tag: Aave_2993
• Symbol: nrdR
• ID: 4667478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax citrulli AAC00-1
• Kingdom: Bacteria
• Replicon accession: NC_008752
• Strand: +
• Start bp: 3299832
• End bp: 3300281
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639824195
• Product: transcriptional regulator NrdR
• Protein accession: YP_971334
• Protein GI: 120611656
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.701897
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.27543
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGTGCC CGTTCTGCAG CCACCCCGAG ACGCAGGTCG TCGAAACGCG CGTGGCCGAG 
GATGGAGACT TCGTGCGGCG GCGCCGGCAG TGCGGGGCCT GCGACAAGCG CTTCACGACC 
TATGAGCGCC CGGAAGTCAG CTTCCCCAAC GTGGTGAAGA AGGACGGCCG GCGCATCGAA 
TACGACCGCA GCAAGCTCAT CGGCTCGTTC AGCATCGCGC TGCGCAAGCG GCCGGTGAGC 
ACGACGCAGA TCGACAGCGC CATCGAGCGC ATCGAGGAAA AGCTGCTCAA CCTCGGGCAG 
CGCGAAGTGC TGTCCAGCCG CATCGGCGAA CTGGTGATGC GCGAGCTCAA GAAGCTAGAC 
AAGGTCGCCT ACATCCGATT CGCGAGCGTG TACCGGAACT TCGAGGACAT CGACGAATTC 
CGGGCGCTCG TGGACGAAGT GCGCAAATAG 

 

Protein sequence

MKCPFCSHPE TQVVETRVAE DGDFVRRRRQ CGACDKRFTT YERPEVSFPN VVKKDGRRIE 
YDRSKLIGSF SIALRKRPVS TTQIDSAIER IEEKLLNLGQ REVLSSRIGE LVMRELKKLD 
KVAYIRFASV YRNFEDIDEF RALVDEVRK