| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2991 |
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| Symbol | |
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| ID | 4668234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3297428 |
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| End bp | 3298315 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824193 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_971332 |
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| Protein GI | 120611654 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.617808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.305104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGT CAGGACGGGT GATCGGCGGA GTGCAGACCT TCGCATCCGA TGTGATCGAC
GGTTTCCTCG AAATCACCCA CAGCAGTTTC GCCCTGGTCG GGCTGACGGT CGCGTTCGGC
GTGATCACCC TCACCGCCCG CCCGGACCTG CGGCAGGCCG GAGAGGAAAA GCTCATGGGC
TGGCTGCAGG CGCGCCAGGT GGCGATGGTC GGCGTGCCGA TGGAGCCCGA GGCCAGCGAG
CGCGCCACGG CCACGAACCC GAAAGACCTG CCCAAGGAGC AGGCCGCCGT CGCGTTCTGG
CTCAGCAAGA AGTACCGCGT GGCGCCCGAA CCCCTCGCCG CGCTGGTCTC CGAGGCCTAC
GAAATCGGCG GCCGCACCAA GCTCGATCCC ACGCTCATCC TGGCCATCAT GGCCGTCGAA
TCGAGCTTCA ACCCCTTCGC GCAAAGCCCC GTGGGCGCAC AGGGCCTGAT GCAGGTCATG
ACGCGGGTGC ATACCGACAA GTACGAGAAC TTCGGCGGCC ATTTCGCCGC CTTCGACCCG
GTGAGCAACC TGCGCGTCGG CGTCCGTGTG CTGCAGGAAT GCATCGCCCG CGCAGGTTCC
CTCGAAGGCG GGCTGCGCTA CTACGTGGGC GCGGCCAACC TGGCCGACGA CGGCGGCTAC
GCGATCAAGG TCATGGCCGA GCACATGCGC CTGCGCCAGG TGGCCAACGG TCGCAACGTG
CCCATCTTCA CGCCTCCGGC ACCGGCCGCT CCCGCCGCGC CCCCGATGCT GTCCACCCAG
GCCCCGGCGC AGACCACGCT GCCGGCCAAG GGCGCGGGCA CCGCCGATGC GTCGCCCGCC
ACCTCCACGG GCGACGACAA GGTCGCCCTG CTCTCCTCCG GGCTCTGA
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| Protein sequence | MTASGRVIGG VQTFASDVID GFLEITHSSF ALVGLTVAFG VITLTARPDL RQAGEEKLMG
WLQARQVAMV GVPMEPEASE RATATNPKDL PKEQAAVAFW LSKKYRVAPE PLAALVSEAY
EIGGRTKLDP TLILAIMAVE SSFNPFAQSP VGAQGLMQVM TRVHTDKYEN FGGHFAAFDP
VSNLRVGVRV LQECIARAGS LEGGLRYYVG AANLADDGGY AIKVMAEHMR LRQVANGRNV
PIFTPPAPAA PAAPPMLSTQ APAQTTLPAK GAGTADASPA TSTGDDKVAL LSSGL
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