| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2984 |
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| Symbol | |
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| ID | 4669002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3277378 |
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| End bp | 3279201 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639824184 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_971325 |
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| Protein GI | 120611647 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.340631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00906327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCACC AGCACGACAT GCCGATCGGC GCCCGCCTCC TTCCTGAAGG CGGCGTCCAC
TTCACCCTCT GGGCCCCCGC CGCCTCGCGG CTCACCCTCC ACCACCGCCG CGCACCGGGC
GCGGAGCCCG CGCAGGTTCC GGGCCGCCGG GATGCGGACG GTTTCTGGCA GGCCACCGTG
CCGGAGGCCG GCCCGGACAC GCTCTATCAA TGGCAGGCGG ACAATGGTCC CCTGGTGCCC
GATCCGGCAT CGCGCAGCAA TCCCGACGGT CCGCACGGCC CGAGCCGCGT GACCGATCCG
GCCGCCTTCG ACTGGACGGT CGAGGGCTGG ACAGGCCGGC CGTGGAGCGA CACCGTGCTC
TACGAACTGC ACGTGGGTAC CTTCACGCCC GAGGGTACGT TCGCCGCGGC CATGCAGCGC
CTGCCCTGGC TGGCCGAACA GGGCTTCACC GCCATCGAGC TCATGCCCGT GGCCACCTTC
GGCGGGCGCC ACGGCTGGGG CTACGACGGC GTTCTGCCGT TCGCGCCGCA CCCGGCCTAC
GGCACGCCGG ACGACATGAA GCGCTTCATC GACCGGGCCC ATGCGCTCGG CCTGATGGTG
TTCCTGGACG TCGTGTACAA CCACTTCGGC CCGGACGGCA ACTACCTGGG CAGCTACGCC
CCGGCCTTCT TCTCGGAAAC CCACCACAGC CCCTGGGGCG CGGCCATCAA TTTCGACGGC
AAGGACAGCG GGCCGGTGCG CGAGTTCTTC ATCCAGAACG CGCTCTACTG GGTGCGAGAA
TTCCGCATCG ACGGCCTGCG CCTGGATGCC GTCCATGCCA TCGTGGACGA CGGATCGCCC
CACGTGCTCG AAGACCTCGC GCAGCGCGTG CGGCAGGCCA CCGAGGGCCG GCACGTCCAC
CTCGTCCTGG AAAACGAGAA GAACGAGAGC CAGCGCCTGG CCCCCCGGCC CGAGCCCACG
CGCTACGACG CGCAGTGGAA CGACGACTTC CACCATGCCC TGCATGTCGC CCTCACGGGA
GAGCGCCAGG GCTACTACGC CGACTACGCG CATGCGCCGC TGGACGGGCT CGCGCATAGC
TTCGCGGGCG GCTATGTGTT CGCGCCCTCG CACCGCGACG GCGATGGCCG GCGCCTGGAA
CGGGCACCCG CCGCGCCCCA GCCCCTGGCC ACGATGGTGA ACTTCTGCGG CAACCACGAC
CAGATCGGCA ACCGCGCTTT CGGCGAGCGG CTCTCGCACC TGGTGCCGCA GCCCGCGGCC
GAACTCGCAC TGCTGTCCGC GCTGCTCACG CCCGCCACGC CGCTGGTGTT CATGGGCGAC
GAATTCGGCG CGGAAACACC TTTCCTGTAT TTCGCCGACT GGACGGGCGA GCTCCGCGAG
GCGGTTCGCC AGGGACGCCA GCGCGAATTC CGGCTCGAAG CCGGCTCGGG CCGCGAATTG
CCCGACCCCT GCGACGCCGC CACCCTCGAA CGCAGCCGCC TCGACTGGCG CCAGGCGGAA
GGCCCCGCCG GACAGGTGCG GCTCGCGCTG GTCCGCAACG CCCTGTCCGC ACGCCGGCAA
TGGATCGCCC CGCGCCTGTC CCGGCTGCGC TCCGGCACGC ACACGGCGCG CCGCGTGGGA
GCGACCGGGC TGCAGGTGGA ATGGGACTAC GACGATGGAA CACGCCTCGT GATGCAAATG
AACCTGGGCA AAGACTCCGT CACGCCGCAG ACCCCTGAGG CGGCCGCCGA GCCTGGCCTG
CGGGTCTTCC AGCACCGCTG GGAAGGCGGT GGCGCCTGGG CCCCTTGGTC CGCGCGGTGG
ACGCTGCAGG GGGTACCGGC ATGA
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| Protein sequence | MKHQHDMPIG ARLLPEGGVH FTLWAPAASR LTLHHRRAPG AEPAQVPGRR DADGFWQATV
PEAGPDTLYQ WQADNGPLVP DPASRSNPDG PHGPSRVTDP AAFDWTVEGW TGRPWSDTVL
YELHVGTFTP EGTFAAAMQR LPWLAEQGFT AIELMPVATF GGRHGWGYDG VLPFAPHPAY
GTPDDMKRFI DRAHALGLMV FLDVVYNHFG PDGNYLGSYA PAFFSETHHS PWGAAINFDG
KDSGPVREFF IQNALYWVRE FRIDGLRLDA VHAIVDDGSP HVLEDLAQRV RQATEGRHVH
LVLENEKNES QRLAPRPEPT RYDAQWNDDF HHALHVALTG ERQGYYADYA HAPLDGLAHS
FAGGYVFAPS HRDGDGRRLE RAPAAPQPLA TMVNFCGNHD QIGNRAFGER LSHLVPQPAA
ELALLSALLT PATPLVFMGD EFGAETPFLY FADWTGELRE AVRQGRQREF RLEAGSGREL
PDPCDAATLE RSRLDWRQAE GPAGQVRLAL VRNALSARRQ WIAPRLSRLR SGTHTARRVG
ATGLQVEWDY DDGTRLVMQM NLGKDSVTPQ TPEAAAEPGL RVFQHRWEGG GAWAPWSARW
TLQGVPA
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