| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2983 |
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| Symbol | |
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| ID | 4669021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3275225 |
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| End bp | 3277381 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824183 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_971324 |
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| Protein GI | 120611646 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.602894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0199459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAG GCGACGCCGC ACCGCACGTG ACCTCCCGCC GCCCGCGCGC CACCCGGCAC
ACCGCCGAGG CCGGCCGGCC GCTGCCCCTG GGCGCCACGG CCGACCGCAA CGGCGTGAAC
TTCGCCGTGC ACGCGCCGGG CGCGGAACGC GTCGAAGTCT GCCTCTTCGC CGATGGCGAG
AACGAGACGC AGCGCATCGC CCTGCCGGCA TTCACCGCCG GCACGTGGCA CGGGCACGTC
AAGGGAATCA AGCCGGGCCA GCGCTACGGC CTGCGAGTCC ATGGACCCTA CGCCCCTGAG
AAGGGGCAGC GCTTCAATCC CGCCAAGCTG CTCATCGATC CGTACGCCCG CGCGCTCGAC
CGCCCCGTGC TCGGCGCCGA CGACCAGTTC GGCTACGAAC TCGGCCACGA GGACGAGGAC
CATGCCGTCA GCAGCGTGGA CAACGGTGCC ACAGCGCCCA AGGCCATCGT GGTCCGCTCG
CGCTTCGACT GGGACGACGA CGTCCCGCCC CGCGTTCCGC CCTCCAGGAC CGTCTTCTAT
GAAATGCACG TTAAGGGCTT CACGCAGACG CTGTCCGGCG TTCCGGAAGG CGAGCGCGGC
ACCTATGCCG GGCTGGCATC GGAAGCCGCC ATCGCCTACC TGAAGGACCT GGGCGTGACC
AGCGTGGAAC TGCTGCCCGT GCAGGCCTTC GTGGACGACA AGCGGCTCGT GGACGCGGGC
CTGGCCAACT ACTGGGGCTA CAACACCATC GCCTTCTTCG CGCCCGAGCC CCGCTACGCC
GCCAGCCGCG GCGACGGCGG CACGGACGAG TTCAAGGCCA TGGTCAGGGC CCTGCACGCC
GCCGGCATCG AGGTGATCCT GGACGTGGTG TACAACCACA CCGCCGAAGG CAACCACCTG
GGCCCCACGC TCAGCCTCAA GGGCATCGAC AACGCCGCCT ACTACCGCCT CTCCCCGGAA
GATCCGCGCT TTTACGTGGA CTACACCGGC ACGGGGAACA CCGTGGACAC GAGCAGCCCC
GCCGCCCTGC GCCTGGTCAT GGACAGCCTG CGCTACTGGG TCACGGAGAT GCACGTGGAC
GGCTTCCGCT TCGACCTGGC CTGCTCGCTG GGGCGCGACG TTTCGGGCGC CTTCACCCAC
CGCGCGGCCT TCTTCGCCGC GGTGGCGCAG GATCCCGTGC TCTCGCGCGT CAAGCTCATC
GCCGAACCCT GGGACCTGGG CCCCGACGGC TACCAGGTGG GCGGCTTCCC CGACGGCTGG
ATGGAATGGA ACGGTCGCTA CCGCGACGTG GTGCGCGACT ACTGGCGCGG CACCGACGGC
AGCCTGCCCG CATTCGCCGC CTGCCTCTGC GGCAGTGCCG ACATCCTGGA AGCACGCCGC
CGCCCGGCGA CCGACAGCAT CAACATCGTC ACCGTGCACG ACGGCTTCAC CCTGGCCGAC
CTCGTCAGCT ACAACGAAAA GCACAACGAG GCCAACCAGG AAGACAGCCG GGACGGCGAA
AACCACAACC GCAGCTGGAA CTGCGGCGCC GAAGGCCCGA CCGAGGACCC CGCCATCCTG
GACCTGCGCG AGCGCCAGAT GCGCAACTTT CTCGCCACGC TCTTCGTGTC GCACGGTACG
CCGCTGCTGC TGGGCGGCGA CGAGCATGCC CGCACCCAGC AGGGCAACAA CAACGGCTAC
TGCCAGGACA GCCCCCTGTC GTGGTACGAC TGGGAGCACG CCGGCCGCAA CGACGCCCAG
CGCCGCTTCA CCGCGGCCCT GATCGCCCTG CGCTCCGAAC TGCCGGCGCT GCGCACCGCG
GTAGCCGACA GCGCCCGGGC CGACTGCGTG GGCGTGCACT GGCACAGCGT CTGGGGCCTG
CCGATGACGG CGGAAGAATG GGACGACCCG CAATCGCGCT GCGTCGCCGC CCTGATGGAG
GCGGATGCCG GCGGCTGCGC GGCGCTCGTC CTCTTCAACG CCACCGCCGA AGACGCGACC
TTCACCCTCC CGCAGGAGGA GCAGGCCCGT TCCTGGACCG TGCGCGTGGA CACGCGCACC
GCCGACGTGC CACCCGCAGA TACCGAGCCT GTAGCTTCCG GAGGCCAATA CGTGCTGCCG
GGGCATTCCA TGGCGATCCT CACCGCATTG GGCGCTTCCG GCGACCCCGC TCCATGA
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| Protein sequence | MKAGDAAPHV TSRRPRATRH TAEAGRPLPL GATADRNGVN FAVHAPGAER VEVCLFADGE
NETQRIALPA FTAGTWHGHV KGIKPGQRYG LRVHGPYAPE KGQRFNPAKL LIDPYARALD
RPVLGADDQF GYELGHEDED HAVSSVDNGA TAPKAIVVRS RFDWDDDVPP RVPPSRTVFY
EMHVKGFTQT LSGVPEGERG TYAGLASEAA IAYLKDLGVT SVELLPVQAF VDDKRLVDAG
LANYWGYNTI AFFAPEPRYA ASRGDGGTDE FKAMVRALHA AGIEVILDVV YNHTAEGNHL
GPTLSLKGID NAAYYRLSPE DPRFYVDYTG TGNTVDTSSP AALRLVMDSL RYWVTEMHVD
GFRFDLACSL GRDVSGAFTH RAAFFAAVAQ DPVLSRVKLI AEPWDLGPDG YQVGGFPDGW
MEWNGRYRDV VRDYWRGTDG SLPAFAACLC GSADILEARR RPATDSINIV TVHDGFTLAD
LVSYNEKHNE ANQEDSRDGE NHNRSWNCGA EGPTEDPAIL DLRERQMRNF LATLFVSHGT
PLLLGGDEHA RTQQGNNNGY CQDSPLSWYD WEHAGRNDAQ RRFTAALIAL RSELPALRTA
VADSARADCV GVHWHSVWGL PMTAEEWDDP QSRCVAALME ADAGGCAALV LFNATAEDAT
FTLPQEEQAR SWTVRVDTRT ADVPPADTEP VASGGQYVLP GHSMAILTAL GASGDPAP
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