Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2980 |
Symbol | |
ID | 4668780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3272576 |
End bp | 3273205 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824180 |
Product | histidine kinase |
Protein accession | YP_971321 |
Protein GI | 120611643 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0761961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0124572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCGC GCGTGCTGGA AAAGGACGGC GACGCCAGCG GACGGACCGG CCGGCTGGGC CAGCGCATCC AGTCGTCCAG CAGCCGCATG CAGCGCCTGG TGAGCCAGGT CATGGACATG TCGCGACTGC AGAGCGGCCT GGGCCTGGAC CTTCAGCTCG CCCGCACCGA TCTCTCCGCC CTGCTCGCCG ATCTCGTCGA CGAAGCCAGC ACGGCCCACC CCGACATCGA ACTGCGCACC CAGTTGCCGC CCCTGCTCGA AGCCAGCGTG GACGCCGACC GGATCGCCCA GGTGTGCGTG AACCTCATGA GCAACGCGCG CCACCATGGC CGGCCGGGGC ATCCGATCCA TGTCTGCGCC CATGCGTTGC CGGGCGGTGG CGCCGCCATC GCCGTCCGGA ACGTGGCCGC GCCCATCGCC GACGCGATCG CGGGCACCCT GTTCAGCCCG TTCAAGGCAT CCTCGACCGG CAACGCCCGC AACCGCTCCG GCATGGGCCT GGGGCTCTAC ATCGCCCATG AGATTGTCAG GGGTCACGGC GGAGACATCG CCTACACCTA CGATGACGGT CATGTGGTTT TCTCGGTACG GATCCCTCCT GCTGCCTCGG GCACAATCGT CGGTTCCTGA
|
Protein sequence | MAARVLEKDG DASGRTGRLG QRIQSSSSRM QRLVSQVMDM SRLQSGLGLD LQLARTDLSA LLADLVDEAS TAHPDIELRT QLPPLLEASV DADRIAQVCV NLMSNARHHG RPGHPIHVCA HALPGGGAAI AVRNVAAPIA DAIAGTLFSP FKASSTGNAR NRSGMGLGLY IAHEIVRGHG GDIAYTYDDG HVVFSVRIPP AASGTIVGS
|
| |