| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2978 |
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| Symbol | |
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| ID | 4669120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3269934 |
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| End bp | 3271637 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824178 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_971319 |
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| Protein GI | 120611641 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0306937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCC CGCTCCACAC CGCGGCCCCC CCGGCGGCGA CCCTCGACAA TTGCGACCGC
GAGCCGATCC ACATTCCTGG AAGCATCCAG GACCACGGCG CGCTCGTCGC TTTCGATGGC
GATGGCGTCG TCCGCTATGC GAGCGCCAAC GCGGAGGACC TCCTGGGCTG CCCGCTGGTG
CCGGGCAGCG TGCTCGAAGG GCTGCTGCCC CAGGCCCCGT GCTCGGCCGT GGCCGACAAG
GTGCGCGAAG GCCTGATGGC GCTGCGGGGG GAAGCCGAAG TCCCCATGCC CGCAGAACTG
CAGGTGGGCA GCCGGCAATT CGACGTGGTG CTGCACATCA GCGACAAGCT GCTCGTGGCC
GAATTCGAGT CGCGCCGGCA CAGCAGCGCG GAACTGGCCG TGTTCGCGGT GCAGGCGCAC
CGGGCCATGG AAAAGCTGCG CAGGCCCCGC GCCATCGACG ACCTGCTGCA GCTGGCCACG
GATGAGCTGC GCGCTCTGAC CGGTTTCGAC CGCGTGATGG CCTACCGCTT CCGGCCCGAC
GACAGCGGCG AAGTGGTCGC CGAATCCTGC ATTCCCACGC TGGACCCCTA CCGGGGGCGG
CGCTATCCGG CCAGCGACAT CCCCGCCCAG GCCCGGCGCC TGTACGTGGT CAACACCCTG
CGCCTCATCG CCGACGTGGG CGCGCCCGTG GTGCCGCTGC TGCAGCGGGA GGCCGGGCCG
CTGGACTTGA GCGCCAGCAT CCTGCGCAGC GTCTCGCCCA TCCACATCGA GTACCTCTCC
AACATGGGCG TGGCCGCCTC GATGAGCGTG TCCATCGTCA TCAACGGCCA GCTCTGGGGC
CTGCTGGCCT GCCACCACAT GCAGCCGCGC CAGGTGCCCT ACAGCGTGCG CATGGCCTGC
GACGTCATCG CGCAGGTGCT GTCGTCCAAC ATCCAGAGTT CCCTGCTGCG CGCCCAGACG
GAGCGCACGG AGGCCGCCGC CACCGTGCGC TCGCGCCTCA TCGCGGACAT CCTGCACTCC
GACGACGAGT ACGCTGCGCT GGCCCGCCAC GCGGCCGAAC TCTGCACTGC CCTCCGCGCC
GAGGCCGCCG TGGTGGCCAC GGGCGCCAAA CTGCAGCTTG TCGGCGGCAT CCAGGAAGAG
GCCGCCCAGG CCATCCTGGA ATGGCTCGGC TCCGGCCCGG ACGACGTTTC CCCGGACCGC
CTGTTCCACA CCCATGCCCT GCCCCGCCGC ATGGAAGCCC TCGCGACACG GGCGGCGCCG
TGGTGCGGCC TGCTGGCCCT GCCCTTCGAC CGCGAACGCG GAGGCTGGGC GCTCTTCCTG
CGCCGCGAGC AGATCGAAAC CATCCACTGG GGCGGCCGGC CCGAAAAGGA AGTCCGTCCC
GGCCCGCTGG GTCCGCGGCT CACGCCCCGG GGCTCTTTCG AGCTGTGGAA GGAAACCGTG
CGCGCCACGG CCGAGCCATG GGAAGGCGTG GAACTCGACA TCGCCGGGCA GGTGCTGGAC
GAACTGCAGC GCGCACAGCA TGCCCGGCAT GCCGAACTCA ACCGGGCCCG CACCCAGCTC
ATGGCGGTGC TAGGTGTTGA GTCTCACGAG GTTGTTCACA CCCGGAATGC GTGTGATGGG
AGGCTGATGG CCGAGCGCGG AGTGTGGCCG GCACCAGTTG TAGCCGTCAA TGAAGGGCTG
CAGGGCAGCC GTGCGTTGGG CTGA
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| Protein sequence | MNLPLHTAAP PAATLDNCDR EPIHIPGSIQ DHGALVAFDG DGVVRYASAN AEDLLGCPLV
PGSVLEGLLP QAPCSAVADK VREGLMALRG EAEVPMPAEL QVGSRQFDVV LHISDKLLVA
EFESRRHSSA ELAVFAVQAH RAMEKLRRPR AIDDLLQLAT DELRALTGFD RVMAYRFRPD
DSGEVVAESC IPTLDPYRGR RYPASDIPAQ ARRLYVVNTL RLIADVGAPV VPLLQREAGP
LDLSASILRS VSPIHIEYLS NMGVAASMSV SIVINGQLWG LLACHHMQPR QVPYSVRMAC
DVIAQVLSSN IQSSLLRAQT ERTEAAATVR SRLIADILHS DDEYAALARH AAELCTALRA
EAAVVATGAK LQLVGGIQEE AAQAILEWLG SGPDDVSPDR LFHTHALPRR MEALATRAAP
WCGLLALPFD RERGGWALFL RREQIETIHW GGRPEKEVRP GPLGPRLTPR GSFELWKETV
RATAEPWEGV ELDIAGQVLD ELQRAQHARH AELNRARTQL MAVLGVESHE VVHTRNACDG
RLMAERGVWP APVVAVNEGL QGSRALG
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