| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2976 |
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| Symbol | |
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| ID | 4668808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3266553 |
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| End bp | 3269222 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824176 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_971317 |
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| Protein GI | 120611639 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.29382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.115477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCC CACCGACCCC GCCCGCCGAG CGCCATGCCG ACATCTTCAT CGGCCAGAGC
GAGATGGCAC GGCGCATGCG CCAGCACGAC TGGGAAGCGA CGCCGCTCGG GCCGCCCGAA
CGCTGGCCCC AGGGGCTCAA GGCCGCGCTG CGCATCCTGC TGACCTCCCG CTTCGAAATG
TGGGTGGGCT GGGGCCCGGA CATCGCTTTC TTCTACAACG ACGCCTACCG CCCCACGCTG
GGCACCAAGC ATCCCCAAGC GCTGGGCCGG CCCACTTCGC AGATCTGGGC AGAAATCTGG
GACGACGTGA AGGACCGGAT GCACGCGGTG TACCAGCGTG GCGAATCCAC CTGGGATTCC
TCCCTGATGC TGCTCATCGA CCGTGCAGGA ACGGGCACCC TCGAGGAGAC CTACCACACC
TTCTCGTACA GCCCGCTGCT GGACGACGAC GGGCGCGTGA ACGGCCTGTT CTGCGCGGTG
TCCGAAGAGA CGCGCCGCGT CATCAGCGAG CGGCGCCTGG CGGTGCTGCA CGAACTGAGC
GCGGCGATGT CGCTGGGCGG CACCCGCCAG CAGGTCGTGG ACGGCGCCTG CGCCACCCTG
GCGAACGCGC AGCACGACCT GCCCTTCTCG CTGATCTATC TCCACGATGC CCACGGCACG
GCGCGGCTGG CCTGCAATGC CGGCGTGCCC TCGGGCCACC GGCTGGCGCC GCGCGAAATC
GCGCCCGGCG CGCCGTGGCC CTGGCGCCTG GACCGGCTCG CGGCCGGCGA GGCCGCATTC
GCAGTCCCAC TGGAGCCGGC GGCCGACACG CCCACCGGCG CGTGGCAGGT TCCGCCACAC
ACCGCGTTCG TGGTGGCGCT GCCCCCGCAA GGGGACGCCC GGTCCGCGGG CTTCCTCGTG
TGCGGTGCGA ATCCGCACCG CCCCGGGGAC GACGCCGAGA CCCGGTCGTT CGTGCAACTG
CTCGCCGGGC AGGTGGCGCC GGCCGTCGCG CAGGCCGAGG CGCTGGAATC CCGCACGGCC
GAGCGCGACC GCCTGCGCGA ACTGTTCAGC AAGGCGCCGG GCTTCATGTG CGTGCTGCGC
GGGCCCGACC ACGTTTTCGA GTTCGTCAAC GATTCATACC AGCAGCTCAT CGGCCGCAGG
GACCTCGAAG GCAAGTCCAT CCGCGACGCC ATGCCGGAAC TGCAGGGCCA GGGCATCCAC
GAACTGCTCG ACGAGGTGTA CCGCACCGGC AGGCCCTACA TCGGCAAGAA CCTCAAGGTC
ATGCTGCAGC GCGATCCCGG CGGTCCGCTG ACCGAGCACT ACCTGAACTT CATCTACCAG
CCCACGCTGG ACGGCACGGG GGCGGTGAAC GGCATCTTCG CCGAAGGCTA CGACGTGACC
GACCAGCGCG TCGCGGAACA GGAACTGCGC GCCCTCAACA GCCACCTGGA AAGCCGGGTG
GCCGAGCGCA CCCGCGACCT GGAGGACGCT CTGGCGCGCC TCACCGCGGA ATCCCGCGAG
CGCGAGGCCG CCCAGGAGGC GCTGCGGCAG TCGCAGAAGA TGGAAGCCGT AGGCCAGCTC
ACCGGCGGTC TCGCGCATGA TTTCAACAAT CTGCTGGCCA CCATCAGCGG CAGCCTCGAG
TTGCTCAACC GGCGCGTGGC ACAGGGGCGC TTCGACGACC TCGCCCGCTA CGTGGCGGTC
GGCCAGGGGG CCGCGCGGCG CGCCGCCTCC CTCACCCACC GCATGCTGGC CTTCTCGCGG
CGGCAGACGC TCGACCCCAA GCCCACCGAT GTGAACCGTC TGGTGCGCGG CATGGAGGAG
CTCATCCGGC GCACCATCGG CCCCGAGACC GAACTGGAGG TCGTGAACGC GGTGGGCCTG
TGGACCACCC ATGTGGACCC CCACCAGCTC GAAAGCGCTC TCCTGAACCT GTGCATCAAT
TCCCGCGATG CCATGCCCGG CGGCGGCCGG CTCACCATAG AGACCGCCAA TGCCTGGATG
GACGAGCGCG CCGGACGCGA GCGCGACCTT CCGCCGGGCC AGTACGTGTC GCTGTGCGTG
ACCGATACCG GCACGGGCAT GGCACCCGAG GTGATGCGCC GGATCTTCGA GCCCTTCTTC
ACCACCAAGC CGATCGGCAT GGGCACGGGC CTGGGCCTTT CGATGGTGTA CGGGTTCGCC
CGGCAATCCG GCGGGCAGGT GCGCGCTTAT TCCGAGCCCG GCATGGGCAC GACGATGTGC
ATCTACCTGC CCCGCCACGA AGCGCCGCCC GAGGATTCCG ACCTGCCGGC CCTGCAGCCC
GCGGAGGCCG GCGAGGGATC GGGCACGGTG CTCGTGGTGG ACGACGAGCC CAGCGTGCGC
GCCCTGGTGG TGGAGGTGCT GCACGAAATG GGCTACCAGA CCATCGAGGC GCACGACGGC
CCCTCCGCAC TGCAGGTGCT GCAATCGCGC ACCCACCTGG ATCTGCTGAT CACCGACGTC
GGCCTGCCCG GCGGCATGAA CGGGCGCCAG CTCGCCGATG GCGGGCGCCT CACGCGGCCC
GACCTGCAGA TCCTCTTCAT CACCGGCTAT GCCGAGAACG CGGCCGTGGG CAACGGCCAT
CTGGAGCGGG GCATGCACGT GCTGACCAAG CCCTTCACGC TCGATGCGCT GGCCCACCGC
GTGCGCACCC TCATCCCGCA ACCGTCATGA
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| Protein sequence | MTIPPTPPAE RHADIFIGQS EMARRMRQHD WEATPLGPPE RWPQGLKAAL RILLTSRFEM
WVGWGPDIAF FYNDAYRPTL GTKHPQALGR PTSQIWAEIW DDVKDRMHAV YQRGESTWDS
SLMLLIDRAG TGTLEETYHT FSYSPLLDDD GRVNGLFCAV SEETRRVISE RRLAVLHELS
AAMSLGGTRQ QVVDGACATL ANAQHDLPFS LIYLHDAHGT ARLACNAGVP SGHRLAPREI
APGAPWPWRL DRLAAGEAAF AVPLEPAADT PTGAWQVPPH TAFVVALPPQ GDARSAGFLV
CGANPHRPGD DAETRSFVQL LAGQVAPAVA QAEALESRTA ERDRLRELFS KAPGFMCVLR
GPDHVFEFVN DSYQQLIGRR DLEGKSIRDA MPELQGQGIH ELLDEVYRTG RPYIGKNLKV
MLQRDPGGPL TEHYLNFIYQ PTLDGTGAVN GIFAEGYDVT DQRVAEQELR ALNSHLESRV
AERTRDLEDA LARLTAESRE REAAQEALRQ SQKMEAVGQL TGGLAHDFNN LLATISGSLE
LLNRRVAQGR FDDLARYVAV GQGAARRAAS LTHRMLAFSR RQTLDPKPTD VNRLVRGMEE
LIRRTIGPET ELEVVNAVGL WTTHVDPHQL ESALLNLCIN SRDAMPGGGR LTIETANAWM
DERAGRERDL PPGQYVSLCV TDTGTGMAPE VMRRIFEPFF TTKPIGMGTG LGLSMVYGFA
RQSGGQVRAY SEPGMGTTMC IYLPRHEAPP EDSDLPALQP AEAGEGSGTV LVVDDEPSVR
ALVVEVLHEM GYQTIEAHDG PSALQVLQSR THLDLLITDV GLPGGMNGRQ LADGGRLTRP
DLQILFITGY AENAAVGNGH LERGMHVLTK PFTLDALAHR VRTLIPQPS
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