Gene Aave_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2967 
Symbol 
ID4669280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3257667 
End bp3258446 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID639824167 
ProductABC transporter-related protein 
Protein accessionYP_971308 
Protein GI120611630 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0379202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.762779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT TGCATATCCA GGGTGTGTCG CGCACGTTCA CCTCGGCCAG GGTGCCGGCC 
ACGCAGGCGC TGCTGCCGGT CGATTTCCAT GTGGCCGACA ACGACTTCGT CACCATCCTG
GGTCCTTCGG GCTGCGGCAA ATCGACCATG CTGCGCATCG TGGCGGGGCT GGACCAGCCC
ACCAGCGGCC GGGTGCTGCT GGACGGCCGG CCGGTCGAAG GCCCGGGCGC CGACCGGGGC
ATGGTGTTCC AGAGCTACAC GCTGTTTCCC TGGCTCACCA TCGAGCAGAA CATCCGTTTC
GGCCTGCGGG AGAGGGGCAT GCCCGAGCCG CAGCAGAAGG AGCGGGCGGC CTATTTCATC
GCCAAGGTGG GGCTGCGCGG CTTCGAACAG CACCATCCCA GGCAGCTCTC GGGCGGCATG
CAGCAGCGCA CCGCCATTGC CCGCGCGCTG GCCAACGATC CGAAGATACT GCTCATGGAC
GAACCCTTCG GCGCGCTCGA CAACCAGACC CGCGTGCTGA TGCAGGAGCT GCTGCTGGGC
ATCTGGGAGG CCGAGCGCAA GACCGTGATG TTCGTCACCC ACGACATCGA CGAGGCCATC
TTCATGGCGA GCCGCGTGGC CGTGTTCAGC GCGCGGCCGG GGCGCATCAA GACGGAGGTC
GCGGTGGATC TGCCGCATCC GCGGCACTAC ACGCTCAAGA CCTCGCCGGA GTTCATGGAA
CTCAAGGCGC GGCTGACCGA GGAAATCCGG GCCGAATCCA CGGCGGCCGA GGCGCATTGA
 
Protein sequence
MSELHIQGVS RTFTSARVPA TQALLPVDFH VADNDFVTIL GPSGCGKSTM LRIVAGLDQP 
TSGRVLLDGR PVEGPGADRG MVFQSYTLFP WLTIEQNIRF GLRERGMPEP QQKERAAYFI
AKVGLRGFEQ HHPRQLSGGM QQRTAIARAL ANDPKILLMD EPFGALDNQT RVLMQELLLG
IWEAERKTVM FVTHDIDEAI FMASRVAVFS ARPGRIKTEV AVDLPHPRHY TLKTSPEFME
LKARLTEEIR AESTAAEAH