Gene Aave_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2930 
Symbol 
ID4668320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3219678 
End bp3220373 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID639824130 
ProductABC transporter-related protein 
Protein accessionYP_971272 
Protein GI120611594 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.208893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.372931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACA TCGACAATCT GCACGCCTAT TACGGCAAGA GCCACGTGCT GCACGGCGTG 
GGTTTCGACG TGGCCCCCGG CGAGATCGTG GCCCTGCTGG GGCGCAACGG CTCGGGCCGC
TCCACCACGG CCAAGGCCAT CATGGGCCTG GTGCACTGGG AGGGCACGCT CGAGTGGAAG
GGGCAGGGGC TCACGGGCCG CAAGCCCTAC GAGATCGCGC ACCTGGGCCT GGGCTACGTG
CCCGAGAGCC GCGACGTGTT TCCCAACCTG ACCGTGCACC AGAACCTGCT GCTGGGCCAG
AAGGGCCGGG GCAAAGGCGG CCGCTGGGGC TTCGACGACA TGTACGCGAT GTTCCCGCGC
CTCAAGGAGC GGCAGCACAC CGAGGCCGGG GTGATGTCCG GCGGCGAGCA GCAGATGCTC
ACGCTCTGCC GCACGCTCAT GGGCGATCCG GACCTCATCA TCATCGACGA GCCCACCGAG
GGACTGGCCC CGAAGATCGT CGAGCTGGTG GGCGAATACC TCACGAAGAT CCGCGAGCGC
GGCGTGTCGG TGCTGCTCAT CGAGCAGAAA CTCACCATCG CGATGCGGAT CTCCGACCGG
GCGCTCGTCA TGGGCCACGG CAGCATCGTC TTCGACGGCA CGCCCGAAGG CTTGCGCGCG
GATACGGCAG TGCGGCGGGA GTGGCTGGAG GTGTGA
 
Protein sequence
MLHIDNLHAY YGKSHVLHGV GFDVAPGEIV ALLGRNGSGR STTAKAIMGL VHWEGTLEWK 
GQGLTGRKPY EIAHLGLGYV PESRDVFPNL TVHQNLLLGQ KGRGKGGRWG FDDMYAMFPR
LKERQHTEAG VMSGGEQQML TLCRTLMGDP DLIIIDEPTE GLAPKIVELV GEYLTKIRER
GVSVLLIEQK LTIAMRISDR ALVMGHGSIV FDGTPEGLRA DTAVRREWLE V