Gene Aave_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2875 
Symbol 
ID4669898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3164682 
End bp3165776 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content70% 
IMG OID639824075 
Productintegrase catalytic subunit 
Protein accessionYP_971217 
Protein GI120611539 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.398245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC TGCAAGATCG CCAGCAACTG GCCCGCGACA TCCAGATCGC CCACGACAGC 
GGCGCGCGGC TGCACCTGGC CTGTCAGGTC GCCGGTATCG ACGTGCGCAC GCTGCAGCGC
TACAAGGCTG CGGGTGGGCT GGCCCAGGGC GATGCACGGC CTCAGGCGCT GCGCCCCACG
CCAAGCCATG CCTTGACCGA GGCCGAACGC CAGCGGCTGG TGCAGGTGGC CAACGCACCG
CGCTTTGCCG ACGTGCCGCC GGCGCGCATC GTGCCCATGT TGGCCGACGA GGGTGTCTAC
CTGGCCAGCG AATCGAGCTT CGCGCGGGTG CTGCGTGCGC ACGGGCAGAA CGCCCATCGC
GGTCGCGCCC GATCGCCGCA GGCCAGCCGC GCGCCCAGCA CCCATGTGGC CACGGCGCCC
GGCCAGGTGT GGTGCTGGGA CATGACCTAT CTGCCGGCCC GCGTCGCCGG GCGCTGGTTC
CACCTGTACC TGATCATGGA TCTGTACAGC CGCAAGATCG TGGGCTTCGA GGTGCACGAC
AGCGACCAGG CCGAGCATGC CGCACGACTG GTGCGCCGCA CGGCGCTGGC CGAGGGCATC
GCCGCGCGCG CCGACAAGCC AGTGCTGCAC GGCGACAACG GAGCCACGTT GAAGGCCACC
ACGGTGCTGG CCATGCTGCA CTGGTTGGGC GTCAAGCCTT CGTACTCGCG CCCCCGCGTG
AGTGACGACA ACGCCTTCGT GGAAAGCCTG TTCCGTACCG CCAAATACCG CCCCGAGTTC
CCCGCCAGCG GCGGCTTCGA CGATCTGGAC CAGGCACGCC AGTGGGCCAG CGGCTTCGTG
CATTGGTACA ACTGCGAGCA CCGCCACAGC GCGATCGGCT ACGTCACGCC GACGCAGCGC
CATGCCGGGC AGGACCAGGC CATCCTGCAG GCTCGCCATC ACCTTTACAC CCAGGCCCGA
CAGCGCAACC CCGCGCGCTG GTCGGGCAGC ACCCGCAACT GGGCGCCGGT CCAATCGGTC
ACGCTCAACC CTGAGCGCGA CGGCATCTCC AATGCCGCGG CGACCGCATC GAATACGCAG
CCTCGGGCTG CTTGA
 
Protein sequence
MIGLQDRQQL ARDIQIAHDS GARLHLACQV AGIDVRTLQR YKAAGGLAQG DARPQALRPT 
PSHALTEAER QRLVQVANAP RFADVPPARI VPMLADEGVY LASESSFARV LRAHGQNAHR
GRARSPQASR APSTHVATAP GQVWCWDMTY LPARVAGRWF HLYLIMDLYS RKIVGFEVHD
SDQAEHAARL VRRTALAEGI AARADKPVLH GDNGATLKAT TVLAMLHWLG VKPSYSRPRV
SDDNAFVESL FRTAKYRPEF PASGGFDDLD QARQWASGFV HWYNCEHRHS AIGYVTPTQR
HAGQDQAILQ ARHHLYTQAR QRNPARWSGS TRNWAPVQSV TLNPERDGIS NAAATASNTQ
PRAA