| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2846 |
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| Symbol | |
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| ID | 4667182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3134612 |
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| End bp | 3137743 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639824045 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) |
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| Protein accession | YP_971188 |
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| Protein GI | 120611510 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.698632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCGC CCTTCGCTTC GCGCCTGCCC GTACGGTTCC CGTGGCTGGG CATTTCCGCG
GCGCTGCTGG CCCTGGGCGT GGGGGCCGGA ATCTGGCAAT GGCAGCGGAT ATCCGTGGAC
GCTGTTGCCC AGGAGCGTTT CGAGCGCGAA GCCGCTGCGG CCACCACCGC GCTGGAGAAC
CACGTGGGTC GCTACCTCGG GCTGCTCACG GGCGTGCGCG GGCTCTTCGT TGCGAACCCT
CGCCTGACCC GTGCCGAGTT CGACAACGCG CTGCGCGAAC TCCGGCTCTG GCCCCAGTAC
GCGGGCATCG TCAACCTGGC GTTCACGCGC TACGTGCTGC ATGCCGACAA GGCCGCGTTC
GAAGCGTCGG TGCGGGCCGA CTCCTCTTTG GCCGCCGGCG GCATGCCGCA GTTCGCCATC
CGCCCGGAGG GCGATCGCCC GGACTACTAC GTCGCGGACT ACGTGTGGCC GCGGTCGGGC
AACATGGGGG TGCTGGGACT GGACATGGGT GCCGTGCCGG CCACCATGGA ATCCGTGCGC
TACAGCCGCG ACAGCGGCAG CGCCATCGCA TCCGCACCCT ACGACATGCG GCAGGCCGCC
GAGCATCCGG CCGCGTTCAG CCTGCGCCTG CCGGTGTTCA CCGATGCGGC GGGGGACGGT
CAGCGCTATG TCGGTTCCGT GGCGGCCGCG ATACGGTTCC ATGACCTCGT CAGCGCGCTG
GGCGGGGAAG GACGCCTCGC AGGGCTGGCA TTGGCGGTGC AGGATGTCGG TTCGGTGCGC
GGAACTCCGC CTCTCGGCGT CACCACGATG CTGGAGCTGC CCGCCACGGC GTCCGGTCCG
CATCGCTACG AGCGCGAATT GCAGATCTAC GACCGGCGGT GGAAGCTGAC TTTCGTTTCT
GAAGGCAGCT TCCTGTCGCC CGCCGAGCGT GCGGTGCCCT GGTTGGCCGC AGCGGGCGGC
ACGATGGCGG CATTGCTGCT GCTGCTCCTG GCGGCATCCT GGCGCTGGCG CGCCGCTGCC
CGGAAGGATC CTTTCCAGAC CCTGTTCGAC CAGGCGGCCG TGGGAGTGGC CCAGGTGGAT
ACCGCCACCC GGCGCTTCGT GCGAGCGAAT GCGCGTTTCT GCGAGATCCT GGGCTACGCG
CCGCAAGAGC TGCTGGCACT CACGGTGCGC GAAGTCACCC ATCAGGACGA CCAGGCCGAG
AGCGAGGCCG CGATCGACCG CATCGCCACG GGCGTGCAGC AGGAGTACCG CTACGAGAAG
CGCTATCTCC GCAAGGACGG AGAGATGGTC TGGGCGGAAC TGCGCATCGC GACGATGCGC
CATGGACGCG GGCAACCGGC CCAGCATATC GCCGTGGTGC AGGACATCAG TGATCGCAAG
CGGATGGAAG CGGCGCAGCA CGACAGCGAA GCTCGGCTGC GGCAGATCCT GTACCGGTTG
CCGGTCGGCG TGTGCCTTGT CGCTCGCGAT GGAACACTGA GCTTCCGCAA CGAACGCTTC
GAACAGATCT GCCGCCATGC CGACGCGGCG CCCGCCACGG TGCGCGAGTG GTGGCATAGG
GTCATCCCGG ATGCCCCGCG CCGCGAGCAG GCCGTGGCCG ATTGGGAAGC GGCCTGCGCC
GCCGCGCTGG CTGGCGACGG CACGCTCGCG TCTCGGGAAT ACGCCATCAC CTGCGGCGAC
GGCTCCGTGC GCACGGTGGA CATGGCAGGG GTGCTGCTGG ACGGCGCCTG CCTCATCACG
ATGGTGGACC TGAGCCAGCA CAAGGCCGCG GAGGAGGAAA TCCACTATCT GGCCTACTAC
GATCCCCTGA CCCAGCTTCC CAATCGGCGG CTGCTGGTGG ACCGGTTGCA GCAGGCGCTG
GCCGCCAGCG TACGGCGCGG CCGGTGCGGC GCGGTGCTCA TGCTGGATCT GGACAATTTC
AAAACGCTCA ACGAAACCCA GGGGCACGAG CGTGGCGACA TGCTCCTGCG CCAGGTGGCG
CAGCGCCTGC GCGGCTGCGT GCAGAACGAG GACACGGTCG CGCGCCACGG GGGCGACGAG
TTCGTCGTGG TGCTCGAAGA CCTGGGGCAG AGTCCGCAGG GCGCCGCCGC CCGGGCGGAG
GATATGGGAC AAAAGATCCT GGCCGCGATG CGCCATCCGT TCACGCTGGA GGGCGAACCC
CACCATACGA CGCTGAGCAT GGGGGTGACC GTGTTTCAGG GAGCGCGTGA GACGGTGGAC
GAGCTGCTGC AGCGCACGGA TCTGGCCATG TACCAGGCCA AGGCCAGCGG CCGCAATGCG
CTGCGGTTCT ACGATCCGCA AATGCAGGCT TCGGTGGCGG CGCGCGCTGC GCTGGAAACG
GACCTGCGGG AAGGCCTGGG CCGTGGCGAC TTCGAACTGT TCTACCAGCC CCAGGTGAAC
CACGGCCGCA TCGTCGGCGC CGAGGCATTG CTGCGCTGGC GCCATCCGGC ACGCGGCTTC
GTTTCGCCCG GCGAGTTCAT TCCCCTGGCG GAAGAAACAG GCCTCATCCT TCCCCTCGGG
GAATGGGTGC TGCGCACGGC CTGCGAGCGG CTGGCCCAAT GGTCGCGCCA CCCGGTGCTG
TCCCGCATCA GCCTGTCGGT GAATGTGAGC GCACGGCAGT TCCACCAGGG TGGTTTCGTC
GGGCAGGTGC TCGCGGCGCT GGCAGGCACG AGCGCGGAGG GTCGCCGGCT GAAACTCGAA
ATGACCGAAA GCCTGCTGCA GCAGGACCTG GAGGACACCA TCCAGAAAAT GCAGCAGCTG
CGGGCCTATG GCGTGGGCTT CTCGCTGGAC GACTTCGGCA CCGGCTATTC ATCGCTGGCC
TATCTCAAGC GCCTGCCGCT GGACGAACTC AAGATCGACC AGAGTTTCGT GCGCGATGTG
CTCACGGACC CGAACGACGC GTCCATCGCC CGGACCATCG TGGCCCTGGG GACCAGCCTG
GGACTGCGGG TCATCGCCGA GGGCGTGGAG ACGGAAGCGC AGCGTGCCTT CCTGGAGCGC
AACCATTGCC ACGCCTGGCA AGGGTATCTG TTGAGCCGTC CCGTGGGGGC GGACGACTTC
GAGCAACTGG TTCTTTCCTT CCCGCAGCAG GACGCGCCCG GCGCGCCCGC TGCGTCCCCG
GTACCGGGCT GA
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| Protein sequence | MPSPFASRLP VRFPWLGISA ALLALGVGAG IWQWQRISVD AVAQERFERE AAAATTALEN
HVGRYLGLLT GVRGLFVANP RLTRAEFDNA LRELRLWPQY AGIVNLAFTR YVLHADKAAF
EASVRADSSL AAGGMPQFAI RPEGDRPDYY VADYVWPRSG NMGVLGLDMG AVPATMESVR
YSRDSGSAIA SAPYDMRQAA EHPAAFSLRL PVFTDAAGDG QRYVGSVAAA IRFHDLVSAL
GGEGRLAGLA LAVQDVGSVR GTPPLGVTTM LELPATASGP HRYERELQIY DRRWKLTFVS
EGSFLSPAER AVPWLAAAGG TMAALLLLLL AASWRWRAAA RKDPFQTLFD QAAVGVAQVD
TATRRFVRAN ARFCEILGYA PQELLALTVR EVTHQDDQAE SEAAIDRIAT GVQQEYRYEK
RYLRKDGEMV WAELRIATMR HGRGQPAQHI AVVQDISDRK RMEAAQHDSE ARLRQILYRL
PVGVCLVARD GTLSFRNERF EQICRHADAA PATVREWWHR VIPDAPRREQ AVADWEAACA
AALAGDGTLA SREYAITCGD GSVRTVDMAG VLLDGACLIT MVDLSQHKAA EEEIHYLAYY
DPLTQLPNRR LLVDRLQQAL AASVRRGRCG AVLMLDLDNF KTLNETQGHE RGDMLLRQVA
QRLRGCVQNE DTVARHGGDE FVVVLEDLGQ SPQGAAARAE DMGQKILAAM RHPFTLEGEP
HHTTLSMGVT VFQGARETVD ELLQRTDLAM YQAKASGRNA LRFYDPQMQA SVAARAALET
DLREGLGRGD FELFYQPQVN HGRIVGAEAL LRWRHPARGF VSPGEFIPLA EETGLILPLG
EWVLRTACER LAQWSRHPVL SRISLSVNVS ARQFHQGGFV GQVLAALAGT SAEGRRLKLE
MTESLLQQDL EDTIQKMQQL RAYGVGFSLD DFGTGYSSLA YLKRLPLDEL KIDQSFVRDV
LTDPNDASIA RTIVALGTSL GLRVIAEGVE TEAQRAFLER NHCHAWQGYL LSRPVGADDF
EQLVLSFPQQ DAPGAPAASP VPG
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