Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2830 |
Symbol | |
ID | 4666093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3109511 |
End bp | 3110173 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639824029 |
Product | NLP/P60 protein |
Protein accession | YP_971172 |
Protein GI | 120611494 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.704353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAG ACCTGCAGCT ACATTTTTTG CAATTAAAAC AAGGCCAACG CGTGATACTC TCGCGCCCCA TGTCACGTTG GATTTGCCTT TTGTTACTGG TTTGCGCCAC CGCCCATGCC GCTCCCCACA ACAACGCAGC CACATCGGCC ACTGATGACC TGGATCGATT CCTGATCGAC AGGCAGCAGG TGCTCAATCA GCTGCGTGAC GTGCGGGCCA GTGTTCAGGA CCGCACCGGC GAACTGATCT CCACCGCAAT GGGCTTCCTC GGCGTTCCTT ACCGCCGAGG AGGCAACACG GCCGACAGCG GTTTCGATTG CAGCGGATTC ATCCGTGCGA TCTACGGCCA GACCATCGGT CTCGCCCTCC CCCGCCGGGC CAACGAACAG GCCGCAGCCA CCGAAACCAT CGACAAGAAG GACCTCCAGC CCGGAGACCT CGTCTTCTTC AACACCATGC GCCGAGCCTA CAGCCATGTG GGCCTGTATC TGGGCGATGG CAAGTTCATC CATTCGCCGC GCAGCGGTGC GGAAGTCCGC GTGGAAGACA TGAGCGCTTC GTACTGGCAG CGCCGCTTCA ACGGAGCCCG CCGCGTGCTC AGCGAAGACC AGTCCGCCAG CGGCGTGCAA CCCTCCGCCT CGGCGCAGAA CCCGCTGAAC TGA
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Protein sequence | MEKDLQLHFL QLKQGQRVIL SRPMSRWICL LLLVCATAHA APHNNAATSA TDDLDRFLID RQQVLNQLRD VRASVQDRTG ELISTAMGFL GVPYRRGGNT ADSGFDCSGF IRAIYGQTIG LALPRRANEQ AAATETIDKK DLQPGDLVFF NTMRRAYSHV GLYLGDGKFI HSPRSGAEVR VEDMSASYWQ RRFNGARRVL SEDQSASGVQ PSASAQNPLN
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