| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2826 |
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| Symbol | |
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| ID | 4667419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3101644 |
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| End bp | 3105426 |
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| Gene Length | 3783 bp |
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| Protein Length | 1260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824025 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_971168 |
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| Protein GI | 120611490 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0616256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATG AAACACTCCT GCTCCTGTGG TCTTACCTCG TCCTGGTGGG CTTGCTGGCC
TCCCTGCCCC CGCGCCTCCT GGCAGGCACA TCCACCCGGC CCGTCCTTCC GGTGCTGGCG
GGGCTGGCAG CCGGCGCGGC CTCATGGTCC CCGCTGGCCA CCACGGCATG GCCGGACGCG
GTACCCACAG CCATCGCGGC GCTGTGCTTC GGATTGCAGG CCGGCGTCGT CAGCGCCCTG
GTCGCCGCCG TGGGCAGCGC CATGCTGCTT CCGGAGGCCA CCTTCCAGGC GGCCGGCCTG
CTCGCCTCGG GCTGCCTGCT GGGTCTTGCA TGGCGATGGG GACAAGACCG GCTCTCGTCC
CGCATGGCAT GGCTGGCCCT GCCGGGCCTG GGATTGACGC TCTCGCTCGC TGCTCGCGCG
TGGAACGGGC AGCCCCCCTG GGCCGTGCTC GGAGGCATAC TGCTCCTGGG GGGCGGCGCG
AAGCTGGTGC TCGGCCGCGC GCAGGCGGTG AACGCCCTCG GCCGGCACCA GACCGACCTG
AATGCGATGC TCGACGCGAG CGGCGGCGGC CGCTGGGAAT GGTTCGTCCA GGAACAGAGG
CTGGTCTGCC ATGGCCCCGT GTACGGGATG CTCGGCATCG ACACCGGTGG CGAAGGCTGT
CCCGTGCAGC GCTGGATCGC CCTGCGCCAT CCGGACGACA CGGAACGGCT CGCCGCGCAC
CTGCAGCGCA TGGTGGACGG GCTGGAAGCC ACGTTCAGCG CGGAATACCG CATGCGCGAC
ACCGGGGGGC GCTGGCGCTG GATCATTTCC CGCGGACAGG TGCGCGAGCG CGACGCCCAT
GGCAAGGTGC TTCGCATGGG GGGCATCCAC CTGGACGCGA CCGCCCTGCG GCAGGTGCAG
GACGCCGTCC GGATCTCCGA GGAGCAACAC TCCGTCGTGT ACCAGATGCT GCCGGACCCG
GCCTGCATCA CCCGCCTGGA AGACGGCCGC TGCATCGACG TGAACCCGGC TTTCTCGGCG
CTGTTCGGCG TTTCCCGCAG CGCCGCCGTC GGCCGCACCT CCCTGGAGCT CGGCCTTTGG
CCATCGGCAG GGGCGCGGGA GGAGATGCTG GCCGTCCTGC GCCGCGAGGG CCGCGTGCAG
CGGATGCCCA TCCAGGTGCA GGCAGCGGGC ACGAAAGCCG TGTCGGGCCT GTTGTCGGCC
AGCCGCGCCA GCATCGGGGG CGAAAACTGC CTCGTTTCGG TGTTCCAGGA TCTGTCCGCG
GCACAGCGTG CCCACGACCA GTTGGCGGCC GCCCACGACA TGCTGGCTCA GGCCGGCCGC
ATGGCGGGCC TGGGTGTCTG GAAGCACCGG CACGGACAGG GGCTGGTGTA TTGGTCGGAC
GTGTGCTTCG ACATCCACGG CCTTCCCCGC GGAGGGCTGC CTCCCGAGCC GGCCGAATAC
CTGCGCGACT TTGTCGCCGC ACCCTTTCGC GCCTCCCTGG CGGACCTCTT CCGGCGGGGC
CGGCAGAGGT CCGTGGGATG GTCTTGCGAA ATGCAGATCC TGAGGGCGGA CGACGGACGC
GCGGTCTGGG TGCGCATCCA TGCCGAACCC CTGCTCGAAG GCGGGGCCGT CACCGGCCTG
CGGGGCGTGA TGCAGGACAT CGACGAGTGG AGGCGCGCGG CCGAGCGGTT GAGCCAGTCC
GAAGACCGCT TCATGCGCAT CTTCGAGTTG ATGCCCTATC CGGTGCTCAT GTCGCGGCGC
TCCGATGGCG CCTACCTCAT GGTCAACGAG GCATGGGAAC GCCTGACGGG CATTCCGCGC
GGCCAGGCGC TGGGCCGCAC GGCCGTGGAA CTGGGCCTTT TCTCGGCGGA GGGGCGCAGG
CAACTGCTCG ACGCGATGAG CGGGCGCACC GTCCACAATG CCCTCGAAAT CACGATCCAC
ACGCGCAATG GCGGCGACCG CACCCTGCTG CAGTCCATGC ATGCCGCCGA ACTCGATGGG
ACACCCGTCT GGCTGGTATC CGCGCACGAC ATCACCGAGC GCAAGCGCAA CGAAGACCTC
GTCCGCGAAC GCGAGGCGCT GCTGTCGCTC ACCCTGTCGG CCGCCTCCCT CGGTCTCTGG
GACTGGGACA TCTCCACGGG CATGGTCACG GGCGACGCGC GCTGGCGCGA GCTGCAGGGC
ATGCCGGACG CCGCCGGCCA GCCCGTGGCC GAAGGCGTGC ACTGGACCAG CGGGATGGCG
CCCGCCGACA TCGAGAACGT CACCGACGCC CTGGAACGGC ACATCGCCCG TCCCGACACC
CACTTCGATG CGACCTGGCA GGTGGCGCCC AGCCAGGCAG CCGCACCGGG CGCGCCCGCG
GGCCGCTGGG TGCGCAACCT CGGCAAGATC GTGGGCCATG ACGAACGCGG CCGTCCGGGC
CGCATGCTCG GCGTCTGCAT CGATGTGACC AGCCAGCGCG TGCAGGAGGA CATGCTCCAG
CAGTTGGCCC ACTTCGACGC GCTCACGGGC CTGCCCAACC GCGTGCAGCT CGCCCGCCGC
CTGGAGCAGG CCATGGCGCA TGCCCGCGCC GGCGGGTGGC AACTGGGGGT GGCCTACCTG
GACCTCGATG GATTCAAGCC GGTGAACGAC CGGCTGGGCC ACAGCGCGGG CGACCGGCTC
CTCGTGATCG TGGCAGGCCG CCTCACCCGC GCCCTGCGCG CCGTGGACTG CGTGGCGCGT
CTCGGCGGGG ACGAGTTCGT GCTGCTGATG CCCGAGCTGC AGTCGCACGC CGATGCCGAG
CAGCTCCTGC ACCGTCTCAT GGAAAACCTC GCTGCGCCCT ACACACTGGG CACGGAGCGT
GTCACGGTCA CCGCCAGCGT CGGCTACACG CTCTATCCGG AAGACGCCTC CGATGCAGAC
ACACTGCTGC GCCATGCCGA CCATGCGATG TATGGCGCCA AGCAGGGCGG ACGCAACCGC
GTGCAGCCCT TCGACGCGGT GCAGGAGCGT GCACGGCAGA CGCTCCGGGA GCAGGCCGAA
CGCCTGCGCG AGGCCCTGGC CCGCGGGCAG TTCATGCTCT ACCTGCAGCC CAAGGTGGAC
ATGCGCTCCG GCACCGTCGT CGGCGCGGAA GCCCTGGCCC GCTGGATCCA TCCCGACAAG
GGCATCGTGA CGCCGGGCGC CTTCCTGCAC CTCATCGAAG CCGCCGAACT GGAAACCGCC
TTCGGCGAGT GGGCCGTGGA GTCGGCCCTC GACCTGATCG AACAGTTGCG CGCCAGCGGC
CTGGAGCTTC CGGTGAGCGT GAACATCTCC GCGCGCCACC TGCAGCAGGA AGGCTTCGCG
CCCTGGCTCG CGGGCCGCAT GGCGCGGCGG CCCGGCATAC CGCACCGCCT GCTCGACCTG
GAAATCACCG AAAGCGCCGC GCTCTACGAC ATGGACCACG TCGCGCCGCA ACTGCAGCAG
TTGCGAGAAC TGGGCATCAC CATATCCCTC GACGACTTCG GCACCGGCTA CTCGTCGCTG
TCCTATCTGC GCCGGCTGCC CATGGACACG CTCAAGCTGG ACCGCAGCTT CGTCCACGGC
ATGATGAGCG ACCGGGGCGA CTACGCCATC GTGCAGGGCG TCATCGGGCT CGCCCGCTCC
TTCGGCTACT CCATCGTGGC CGAAGGGGTG GAGACAGAGG CCCAGGGATT GACCCTCATG
CGCCTGGGCT GCACCCTGGC CCAGGGGTAC TGCATCTCCC GGCCCATGGC TCCCGAGGCT
TTTCCCGAAT GGGTGGCGCA GTGGCGCGCC CCGGAAACCT GGCGTCCGCC CGTGGTGGTG
TGA
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| Protein sequence | MADETLLLLW SYLVLVGLLA SLPPRLLAGT STRPVLPVLA GLAAGAASWS PLATTAWPDA
VPTAIAALCF GLQAGVVSAL VAAVGSAMLL PEATFQAAGL LASGCLLGLA WRWGQDRLSS
RMAWLALPGL GLTLSLAARA WNGQPPWAVL GGILLLGGGA KLVLGRAQAV NALGRHQTDL
NAMLDASGGG RWEWFVQEQR LVCHGPVYGM LGIDTGGEGC PVQRWIALRH PDDTERLAAH
LQRMVDGLEA TFSAEYRMRD TGGRWRWIIS RGQVRERDAH GKVLRMGGIH LDATALRQVQ
DAVRISEEQH SVVYQMLPDP ACITRLEDGR CIDVNPAFSA LFGVSRSAAV GRTSLELGLW
PSAGAREEML AVLRREGRVQ RMPIQVQAAG TKAVSGLLSA SRASIGGENC LVSVFQDLSA
AQRAHDQLAA AHDMLAQAGR MAGLGVWKHR HGQGLVYWSD VCFDIHGLPR GGLPPEPAEY
LRDFVAAPFR ASLADLFRRG RQRSVGWSCE MQILRADDGR AVWVRIHAEP LLEGGAVTGL
RGVMQDIDEW RRAAERLSQS EDRFMRIFEL MPYPVLMSRR SDGAYLMVNE AWERLTGIPR
GQALGRTAVE LGLFSAEGRR QLLDAMSGRT VHNALEITIH TRNGGDRTLL QSMHAAELDG
TPVWLVSAHD ITERKRNEDL VREREALLSL TLSAASLGLW DWDISTGMVT GDARWRELQG
MPDAAGQPVA EGVHWTSGMA PADIENVTDA LERHIARPDT HFDATWQVAP SQAAAPGAPA
GRWVRNLGKI VGHDERGRPG RMLGVCIDVT SQRVQEDMLQ QLAHFDALTG LPNRVQLARR
LEQAMAHARA GGWQLGVAYL DLDGFKPVND RLGHSAGDRL LVIVAGRLTR ALRAVDCVAR
LGGDEFVLLM PELQSHADAE QLLHRLMENL AAPYTLGTER VTVTASVGYT LYPEDASDAD
TLLRHADHAM YGAKQGGRNR VQPFDAVQER ARQTLREQAE RLREALARGQ FMLYLQPKVD
MRSGTVVGAE ALARWIHPDK GIVTPGAFLH LIEAAELETA FGEWAVESAL DLIEQLRASG
LELPVSVNIS ARHLQQEGFA PWLAGRMARR PGIPHRLLDL EITESAALYD MDHVAPQLQQ
LRELGITISL DDFGTGYSSL SYLRRLPMDT LKLDRSFVHG MMSDRGDYAI VQGVIGLARS
FGYSIVAEGV ETEAQGLTLM RLGCTLAQGY CISRPMAPEA FPEWVAQWRA PETWRPPVVV
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