| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2795 |
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| Symbol | |
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| ID | 4668484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3068855 |
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| End bp | 3070135 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639823994 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_971137 |
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| Protein GI | 120611459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.926116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTGA CCCTGATTTT TCTCGGCGTG CTGATCGGCG GCATGGCCAT CGGCATGCCG
ATCGCCCAGT CGCTGATCCT CACCGGCGTC GCCCTGATGT GGCACCTGGA CTTCTTCGAT
TCCCAGTTGC TCGCGCAGAA CCTGCAGGCG GGCTTCGACA ACTTCCCATT GCTGGCGGTG
CCGTTCTTCA TCCTGGCCGG CGAACTGATG AACGCCGGCG GGCTCTCGCG CCGCATCATC
GACCTGGCGC GCGCCTTCGT CGGGCACATC CGCGGCGGCC TGGGCTTCGT GGCCATCGGC
GCGGCGGTGC TGCTCGCGTC GATGAGCGGC TCGGCCATCG CCGACACGGC AGCGCTCGCC
ACCATCCTGC TGCCCATGAT GCGCCAGCAG AACTATCCGT CCAGCTACAG CGCCGGCCTG
CTGGCCTCGG GCGGCATCAT CGCGCCGATC ATTCCGCCCT CGATGCCGTT CGTGATCTAC
GGCGTGACCA CCAACACCTC CATCAGCAAG CTGTTCCTGG CGGGCGTGTT CCCCGGGCTG
ATGATGGGCA CCTTCCTCAT CCTCGCCTGG TGGTGGATCG CGCGCAGGCA CCGGCTGCCG
GCCATGGAGC GCGTGGCCTG GGGCGCGCGG ATGCGCGCGC TGCTGCACAG CTTCTGGGCC
ATGATGATGC CGGTCATCAT CCTCGGCGGG CTCAAGGGCG GCATCTTCAC GCCCACCGAG
GCCGCCGTGG TGGCCGCCGT GTACGCGCTC ATCGTCTCGA TGTTCGTCTA TCGCGAGATG
ACGTGGGGCC GGCTCTACGA AGTGTTCCTC GCCGCGGGCA AGACCACCGC GGTGGTGATG
TTCCTCTGCG GCGCGGCCAC CGTGACGGCC TACATGATCA CCCTGGCGGA CCTGCCCAAC
CTGCTGGCCG ACAGCTTCGC GGGCGTCATG GGCAACCCCA TGCTGTTCAT GGCGCTGATG
ATGGTGTTCC TGCTGGTGGT CGGCACGGCC ATGGATCTCA CGCCCACCAT CCTGATCTTC
GGCCCCGTGT GCGTGCCGCT CGCCGTCAAG GCCGGCATCG ATCCGGTGTA CTTCGGCTTC
ATGTTCATCT ACGTGGGCTG CGTGGGGCTC ATCACGCCGC CCGTGGGCAC GGTGCAGAAC
GTGGTGGCCG GCGTGGGCCG GCTGCGCATG GAGACCGTCA TCCGCGGCAC CACGCCGTTC
CTGCTGGTGT ACGTGCTGCT GCTGATCCTG TTCGTGATCT TCCCGCAGAT GATCACCGCG
CCGCTGGGCT GGCTGCATTG A
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| Protein sequence | MVVTLIFLGV LIGGMAIGMP IAQSLILTGV ALMWHLDFFD SQLLAQNLQA GFDNFPLLAV
PFFILAGELM NAGGLSRRII DLARAFVGHI RGGLGFVAIG AAVLLASMSG SAIADTAALA
TILLPMMRQQ NYPSSYSAGL LASGGIIAPI IPPSMPFVIY GVTTNTSISK LFLAGVFPGL
MMGTFLILAW WWIARRHRLP AMERVAWGAR MRALLHSFWA MMMPVIILGG LKGGIFTPTE
AAVVAAVYAL IVSMFVYREM TWGRLYEVFL AAGKTTAVVM FLCGAATVTA YMITLADLPN
LLADSFAGVM GNPMLFMALM MVFLLVVGTA MDLTPTILIF GPVCVPLAVK AGIDPVYFGF
MFIYVGCVGL ITPPVGTVQN VVAGVGRLRM ETVIRGTTPF LLVYVLLLIL FVIFPQMITA
PLGWLH
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