| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2794 |
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| Symbol | |
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| ID | 4668477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3067753 |
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| End bp | 3068769 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823993 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_971136 |
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| Protein GI | 120611458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.879508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC GTTTCGCCCT CGCCACCCTC GTGGCCGCCA TCGCCGCCAG CGGCGCGTCC
GTCGCCCAGG CCCAGGACTT CAAGCCGCGC ATCGTGCGCT TCGGCTACGG CCTGGTGGAC
AACTCCAACC AGGGGCGCGC CGTGCGCTTC TTCGCCCAGG AAGTCGAGAA GGCCACGGGC
GGCAAGATGA AGGTGCGCGC CATCGGCAAC GCCTCGCTGG GTTCCGACAC GCAGATGCAG
CAGGCGCTCA TCGGCGGCGC GCAGGAGATG ATGGTCGGCT CCACCGCCAC GCTGGTCGGC
ATCGTGCCCG AGATGGCCGT GTGGGACACC CCCTTCCTCT TCGCCAACGT GAAGGAAGCC
GACACGGTGC TCGACGGCCA CGTCGGCGAG AAGGTGAAGG CCAAGCTCGA ACCCAAGGGC
ATGGTCGGCC TGGTCTATTG GGAGAACGGC TTCCGCAACC TCACCAACAG CAAGCGCCCC
GTCACCAGGC TGGAAGACAT GGGCGACATC AAGCTGCGCG TGATGCAGAA CAACGTCTTC
CTCGACAGCT TCAAGGCCCT GGGCGCCAAC GCCGTGCCGC TGCCGTTCTC GGAGCTCTTC
ACCGCACTGG AGACGCGCGC CGTCGATGGC CAGGAGAACC CGTTCAACAC CGTGGTGTCG
AGCAAGTTCT ACGAGGTGCA GAAGTACCTC ACCGTCACCA ACCATGTCTA TAGCCCGTGG
ATCGTCACGG TGAGCAAGAA GTGGTGGGAT ACCCTCAGCC CGGCCGAGAA GAAGGTGCTG
CAGGACGCCG CCGCGAAGAG CCGCGACTTC GAACGCAAGG ACACGCGCGA GGAAGCCGCC
AAGGCGCTGG CGGACCTGAA GACCAAGGGC ATGCAGGTCA ACGAACTGCC CGCGGCCGAG
GCCAACCGCA TGCGCGAGAA GCTCACGTCG GTGAACGCCG GCATCGCCAA GTCGGTGGGC
CAGGAGACCT GGGACGCGGT GCAGGCCGCC GTCCAGCAGG CCCGCGGCGG CCAGTAA
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| Protein sequence | MRIRFALATL VAAIAASGAS VAQAQDFKPR IVRFGYGLVD NSNQGRAVRF FAQEVEKATG
GKMKVRAIGN ASLGSDTQMQ QALIGGAQEM MVGSTATLVG IVPEMAVWDT PFLFANVKEA
DTVLDGHVGE KVKAKLEPKG MVGLVYWENG FRNLTNSKRP VTRLEDMGDI KLRVMQNNVF
LDSFKALGAN AVPLPFSELF TALETRAVDG QENPFNTVVS SKFYEVQKYL TVTNHVYSPW
IVTVSKKWWD TLSPAEKKVL QDAAAKSRDF ERKDTREEAA KALADLKTKG MQVNELPAAE
ANRMREKLTS VNAGIAKSVG QETWDAVQAA VQQARGGQ
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