Gene Aave_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2789 
Symbol 
ID4668857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3062194 
End bp3062997 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content63% 
IMG OID639823988 
ProductABC-2 type transporter 
Protein accessionYP_971131 
Protein GI120611453 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCC TGCAGGCATC GCTGATGCGC ATCGCTGCCA TCAGCGTGCG CCACCTGGTG 
GTGCTGCTGC GGTCCTGGCC ACGATTGGTG GAGTCCGTGT ACATGCCTAC CGCCACGCTG
ATGCAGTGGG TCATCTTCAA GAACTACCTC AGCGCCCAGT CCCTGCCCAC GTTGGGAAGC
ACTTTGCTCG TTTCCTACCT CATGTGGGAA ATCATCTTCA GGTTCAAGCA GGGCACTGTC
ATGTCGTTGT TCACGGAGAT GTGGGGCCGC GCTCTGCCGC AGCTCTTCAC AACGCCCCTG
ACGCCGCTGG AAATGATGTT CGGATGTTTC ATCGTGGGAC TCGTGCGCGC GGTGCTCGGA
ATCGGCATTG CCGTGGCCGT CGCCCTGGGA GCAGGCTGGT CGGACTACAT CGACCTGCGC
GGCTCCGTGC TGGTGGTGAC CGTATTCGCG TTGATGTCCT CGGCAGCCGT CTCCCTGATC
ATGTCCGGCG TCATCCTGCG CTGGGGCATC GCCGCAGAGA TCCTTTCGTG GGCGCTGGTA
CTGACGCTTG CCCCGCTGTC CGGCGTCCTG TATCCCACCT CCGCGCTTCC CCTTGGGCTG
CAATGGGTGT CCGCACTGCT GCCGACGACC TACGTTTTCG ACTGCGTCAG AGAGCTGCTC
GCCACGGGGT CCATCATGGG CGGCACCCTG TCCTTGGTCG CTGCCACCGC CAGTGCCTGG
CTTGCCATCG GCCTGGCGCT CTTTCTCATG ATGTTCGAGA ACACCCGAAA AAGCGGATTG
CTGGACGGAG GCCCCGTTGA CTAG
 
Protein sequence
MRPLQASLMR IAAISVRHLV VLLRSWPRLV ESVYMPTATL MQWVIFKNYL SAQSLPTLGS 
TLLVSYLMWE IIFRFKQGTV MSLFTEMWGR ALPQLFTTPL TPLEMMFGCF IVGLVRAVLG
IGIAVAVALG AGWSDYIDLR GSVLVVTVFA LMSSAAVSLI MSGVILRWGI AAEILSWALV
LTLAPLSGVL YPTSALPLGL QWVSALLPTT YVFDCVRELL ATGSIMGGTL SLVAATASAW
LAIGLALFLM MFENTRKSGL LDGGPVD