Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2783 |
Symbol | |
ID | 4669266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3055950 |
End bp | 3056684 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639823982 |
Product | ABC transporter-related protein |
Protein accession | YP_971125 |
Protein GI | 120611447 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.474433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATAC GTCCTATTGT GTTGCGCGGA CTCGGAAAGC GCTATGGAAA CCACGTTGCC GTCCACGGTC TCGACCTGGA GGTCGATAGC GGCAGGTGCC TTGGACTGAT CGGCCACAAC GGCGCCGGGA AGACCACATC ATTGTGCATG CTGGCGGGCC TGGTCGTGCC TACCTGCGGT ACGGCAACGA TCCTGGGAAA GAATATCGCG AAGCGGCCGA AGGACGTCCT GGCGAGAATC AATTTCATGT CCGCGTACAT GGACCTGCCT GGCGGGCTGA AAGTCCGGGA GCTGCTGCTG CTCTTCGCGC GCCTGTACGG TCTGGATCGC GTCCGGGAGC GGGTGGAGCA AAGCATGAAC GACTTCGGGA TCGATCCGTC GCTCGGGGGC CGGTTCGTCA ACACGCTGTC GGCCGGTCAA CGGGCCAAGG TACTGCTTGC CAAGGGATTC GTGAACGCTC CACAGGTGGT GCTGCTGGAC GAGCCCACCG CGGCGCTGGA TCCGGTAAGT GCCAGATCCG TACGGGCGTC CATCGCCAAC GCCAAGCGGA TCGGCGGCAC CACGATCGTG CTGGCCTCGC ACAACATGCG CGACATCGGC GAGCTGTGCG ACGAAGTGCT GTTCATCGCG CGAGGCCGCG TCGTCGCTTA TGGCGCGCCC GAGGTGCTCA GGCAGCAATA CCACTGCGCG GACCTGGACG AGCTCTACAT AAGGCTGTCT GCCTCTGCGG CCTAG
|
Protein sequence | MTIRPIVLRG LGKRYGNHVA VHGLDLEVDS GRCLGLIGHN GAGKTTSLCM LAGLVVPTCG TATILGKNIA KRPKDVLARI NFMSAYMDLP GGLKVRELLL LFARLYGLDR VRERVEQSMN DFGIDPSLGG RFVNTLSAGQ RAKVLLAKGF VNAPQVVLLD EPTAALDPVS ARSVRASIAN AKRIGGTTIV LASHNMRDIG ELCDEVLFIA RGRVVAYGAP EVLRQQYHCA DLDELYIRLS ASAA
|
| |