| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2782 |
|---|
| Symbol | |
|---|
| ID | 4669347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3054854 |
|---|
| End bp | 3055768 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639823981 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_971124 |
|---|
| Protein GI | 120611446 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGC GCATCCACCT CAGCATCGTC CGGCAGGTCG AGAAGCAAGG CTCGCTGACG
GCCGCCGCGG GCGTGCTGAA CCTCACCCAG TCGGCCCTGA GCCACAGCAT GAAGAAGCTC
GAGCAGCAAC TGGGCACCGA TGTCTGGCTG CGCGAAGGCC GCAGCCTGCG CCTGACGCAG
GCGGGCCAGT ACCTGCTGGC CGTGGCCAAC CGCGTGCTGC CGCAACTGGA ACTGGCCGAG
GAGCGGCTGG GCCAGTTCGC GCAGGGCGAG CGCGGCGCGC TGCGGATCGG CATGGAATGC
CACCCGTGCT ACCAATGGCT GCTCAAGGTG GTTTCGCCCT ACCTGACCGC GTGGCCCGAC
GTCGATGTGG ACGTCAAGCA GAAGTTCCAG TTCGGCGGGA TCGGCGCCCT CTTCGGCTAC
GAGATCGACC TGCTGGTCAC GCCCGATCCG CTGTACAAGC CCGGGCTGCA GTTCGAGCCC
GTGTTCGACT ACGAGCAGGT GCTGGTCGTG GCCGGGGGCC ACGCCCTGGC TTCGGCGGCC
TACGTGAAGC CGCAGCAGCT GACCGGGGAA GTGCTCATCA GCTACCCGGT GGACATCGAG
CGCCTGGACA TCTACAACCA GTTCCTCCTG CCGGCCGGCG TCACGCCCCG GCGCCACAAG
GCCATCGAGA CCACCGACAT CATGTTGCAG ATGGTGGCCA GCGGCCGCGG CGTGGCCGCC
CTGCCGCGGT GGCTGGTGGA GGAATACGCC GCCCGGATGG ACGTGGTGCC CGTGCGGCTG
GGTGCGCGCG GCATCGCCAA GCAGATCTTC CTGGGCGCGC GCGAGGCGGA CACCGCCATC
GACTACGTGC GGGCCTTCAT CGAGCTGGCG CGCCAGCCTG CGGCCGCCAC TGCGGGAAGA
GCCTGGCGGC CATGA
|
|---|
| Protein sequence | MLERIHLSIV RQVEKQGSLT AAAGVLNLTQ SALSHSMKKL EQQLGTDVWL REGRSLRLTQ
AGQYLLAVAN RVLPQLELAE ERLGQFAQGE RGALRIGMEC HPCYQWLLKV VSPYLTAWPD
VDVDVKQKFQ FGGIGALFGY EIDLLVTPDP LYKPGLQFEP VFDYEQVLVV AGGHALASAA
YVKPQQLTGE VLISYPVDIE RLDIYNQFLL PAGVTPRRHK AIETTDIMLQ MVASGRGVAA
LPRWLVEEYA ARMDVVPVRL GARGIAKQIF LGAREADTAI DYVRAFIELA RQPAAATAGR
AWRP
|
|---|
| |