| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2752 |
|---|
| Symbol | |
|---|
| ID | 4666671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3024781 |
|---|
| End bp | 3026166 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639823951 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971094 |
|---|
| Protein GI | 120611416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0961114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCCT TCGCCCTGCC GCGGCTGCGC CTGCGCCCGG TGCTCGTCGC TGCATGCACG
GCCGCCGCGC TGCTCGCCGG CGCGTCCCCC GCGTCCGCGC AGCCTGTCTC TTCGTCCAGC
CTCTACTACC GCATGGGCGG CGGATCTCCC GGCGGCGCCG CGCCCAACCG CGGAATGATG
GCAAACCAGT TCAGCGCCGG CGTGCGGGCC AACTACTCGT GCGGACGGTT CGACATCGGT
GCGTCCTGGT CGTCGCTCAT GAACGGCATC TCCAACCTGG GCGCCACCAT CTCCGGCGCC
ATCCAGGCGG GCATTGCCGC ACTTCCGCTG TACTTCCTGC AGCGGGCTCA GCCCGGGCTG
TACCAACTCT TCCAGAATTT CTCGCAGAAG GCCGATCTGC TGGTGGCATC CTCGCTCAAG
TCCTGCGAGG ACATGGAGGC GCTGATCAAG GCCGGCAAGG ATCCCTACGA GGACTACGTG
GCGTTGGCCA AGGGCGATGC CTGGAAGATC GCTGCCTCCA CCGGCGGTAA CGTCGTCGAT
GCCAAGATCG CCATCAACAA GAACGAGGTC GCCCAGCGCG CGGGCCTGCC CTGGGTGTTC
GGAACCCGGG CAGGCGGCGC CGGCACCGCG CCCATTCAGC CGGTGCGTGA CCTGGCCGTG
GCCGGCTACA ACCTGACCAT CAACAAGACG GCCAGCACGA TCTCGACAGC CAACTACGGC
AGTTCCTCCC TCGCGTCCAC CCGCCTGGTC CAGGCGTTCA AAACGCCGGA CGACTTGGCG
AAGTGGAGCA CCGAGGTCCT GGGCGATCAG AAGATCTACC TGTGCACGCA GGACTCCAGC
TGCCCGACCG CGACTTCCAC GGTGACGGCC ACCGGCCTGG GCCCGAAGTT CGAGCAGGAG
CTCGAATCCG TGCTTCCGAC GATGCGGACG CTCGCCGAGG CGAACACGGT CGGACAGGCC
GACCTGGTCA AGGTGAGCGC CCCGGGCATG GCCGTGAGCC CGCAGCTGAT GGATGCGATG
CGCAAGCTGC CGAAGGATGT GCGATCCGTG GCCGTGAACC GCCTGGCGCA GGAGATCGCC
ATGCATAAGG TGGTGGACAA GGCCCTGGTG GCGCGCAACG CGCTGATTTC CGGGCTGAGC
TTGCCGCAGG CGAGCGCAAA CGGCCAGGTC AACAGCGAGG TGCAGACCAA GATCGACCGC
CTGACCCAGT ACATCAATGA CCTCATGTAC GAGTTCCGGA TCCGCAAGGA GATGACCGGC
GAAACAGCCC TGGCGATCAT GCAGAACCAA CTGGCGGCAG GCGCTTCGTC CAACGCGGTC
ACCGGCGGCT CGCGGGCCGA TCCCGCGCCG GTCTTCGACG GCCGCGTCGA GGTTCCCAAG
CAATGA
|
|---|
| Protein sequence | MSPFALPRLR LRPVLVAACT AAALLAGASP ASAQPVSSSS LYYRMGGGSP GGAAPNRGMM
ANQFSAGVRA NYSCGRFDIG ASWSSLMNGI SNLGATISGA IQAGIAALPL YFLQRAQPGL
YQLFQNFSQK ADLLVASSLK SCEDMEALIK AGKDPYEDYV ALAKGDAWKI AASTGGNVVD
AKIAINKNEV AQRAGLPWVF GTRAGGAGTA PIQPVRDLAV AGYNLTINKT ASTISTANYG
SSSLASTRLV QAFKTPDDLA KWSTEVLGDQ KIYLCTQDSS CPTATSTVTA TGLGPKFEQE
LESVLPTMRT LAEANTVGQA DLVKVSAPGM AVSPQLMDAM RKLPKDVRSV AVNRLAQEIA
MHKVVDKALV ARNALISGLS LPQASANGQV NSEVQTKIDR LTQYINDLMY EFRIRKEMTG
ETALAIMQNQ LAAGASSNAV TGGSRADPAP VFDGRVEVPK Q
|
|---|
| |