Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2735 |
Symbol | |
ID | 4665585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3004161 |
End bp | 3006527 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639823934 |
Product | Rhs element Vgr protein |
Protein accession | YP_971077 |
Protein GI | 120611399 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0298298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGG ATGGCGCTCG CCGATGCAAA ATGACACGCC GCGTCACCAT CCAGACGCCC CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGATA TCGACCTGCT CTCGGAGGGG CGCGAAATCG ATCCCAAGAC GCTGTTGGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA GGCGGGGGCA AGCGCTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGCCAGGAC CATCGGCTGT ACTCCTACCA CCTGCGCCTG CAACCCTGGC TGTGGGTGGC CACGCGGCGG CAGGACTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTCCAGGA AGTGCTGGGC CGCTACGGTT ACCCGATGCA ATTGAAGCTC ACGCGCGCCT ACCGCGCCTG GGACTACTGC GTGCAGTACG GCGAGAGCGA CTTCGACTTC GTATCGCGCC TGCTCGAGCA TGAAGGCGCG TATTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCCGA CGACATCGTG GCCGGCCACG AGCCCTTGCC GGGCGCGGCC GTGATCCCGT TCTACCCACC CGAGAAATCG GCCACCGCCG ACCGCGAGAA CATCCACGCC TGGAGTCTGG GCGAAGAAAT CAAGCCCGGC AGGTACTACA ACGACGACTA CGACTTCAAG AAGCCGAGGT CGGACCTCTC CAACATGCGC CAGCAGCCCC CGGGCCATGC GCACGATGCC TACGAGATCT ACGAATGGCC GGGCGGCTAC GTGCAGCACG GCGACGGCGA GCAGTACGCC CGCGTGCGCC TGCAGGAAGG CCTGACGGGC CACAGCACCG TCCGGGGCGA ATCCCGCCAT CGCAGCCTGG CGCCGGGCTA CACCTTCACG CTGGAGAACT ACCCGCGCGG TGACCAGAAC CGGCAGTACC TCATCACGGG CGTCACCTAC CACCTGCACG AGAACCCGCG CAGCTCATCG TTCAACAGCG CCAAGCCGGG CGAGGCGCTC AAGCACAACG AAGAGCAGGG CTCGTTCCAG AAATTCAGCC TCACGGCCCA ACCCACGAGC CTGCCTTACA CCCCCGCCAG AAAGACGCCC AAGCCCAGAA CCACCGGCCC GCAGACCGCC GTCGTGGTCG GCCCGGCCGG CGAAGAAATC TGGACGGACG AATACGGCCG CATCAAGGTG CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCATCTGCTG GATGCGGGTG GCCACGAGCT GGGCGGGCTC GGGCTTCGGG GCGATCTCGA TCCCGCGCAT TGGGCACGAA GTGGTGGTCG ACTTCCTCAA CGGCGATCCG GACTACCCGC TGGTCGTGGG CTGCGTCTAC AACGCCGCCA ACATGCCGCC CTGGGCCTTG CCGGGCAATG CCACGCAGTC GGGCATCAAG ACCAAGTCCA GCAAGGGCGG GGCCTTCGGC GACGGGATGA AGAACGGCGC GGGCGATGCC AACGCGATCC GCTTCGAGGA CAAGAAGGGC GCAGAGCAAT TATGGCTGCA TGCGCAGAAG GATCAGCTCA CCGAGGTCGA GAACGACGAG GACAAGTGGG TGGGCCAGGA CCGGCGAAAG ACGATCGACC GGGACGAAAC CACCATCGTG CATCGGGACC GGACAGAAAC CGTGGACCGC GACGAGAAGA TCACGGTGCA CAACAACCGC ACCGAGCGGG TAGACCACGA CGAGACGATC AGCATCGGCG ACAACCGCCG GGAAGACGTC GGCATCGACG AGACGGTCTC CATCGGGAAG AACCGCACGA AGACCATCGG CCGCAACGAG AAGGACAAGA TCGGCAACAA CTGGTCGATC AAGGTCGGCA AGATGAAGAC CGAGACCATC GGCATAGCCT ACATGCAGAA CGTGGGCGTG GGCCGGATGG AGAACGTGGG CGTGGCCTAC AACCTCAACG TGGGCGCCGT CATGGCCACC GTGGTCGGCA GTACGCAGAC CACAATGGTT GGCAGCGACC GCAGCGTGAA GGTCGGCTCC AACCAGAACA CGGACGTGGG TACCAAGTAC ACGCTCACCG TGGGCGGTGG CGGTGGTGGA GCCGGGGCGC CCGCCGCGGG CGGCGCCAAG AACATCGTGG CCTCCTCACC GCAAGGCGGC GGCGGCGGCG GCGGCGGATC GAGCATCACC ATGGATGCCG AGTCCATCAC CCTCAAGGTG GGCGCAAGCA CGCTGATCCT GCAGGCCGAC GGCACCATCA CCGCCAACGG CGAGAGCATA AAGCTCATCG GCGCCAGCGA CGTCACCACC AACTCCGGAG GCATCCATGA AAACTGA
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Protein sequence | MRQDGARRCK MTRRVTIQTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG REIDPKTLLG KTATVEIETE GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG RYGYPMQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV AGHEPLPGAA VIPFYPPEKS ATADRENIHA WSLGEEIKPG RYYNDDYDFK KPRSDLSNMR QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSTVRGESRH RSLAPGYTFT LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGEAL KHNEEQGSFQ KFSLTAQPTS LPYTPARKTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSICWMRV ATSWAGSGFG AISIPRIGHE VVVDFLNGDP DYPLVVGCVY NAANMPPWAL PGNATQSGIK TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQLWLHAQK DQLTEVENDE DKWVGQDRRK TIDRDETTIV HRDRTETVDR DEKITVHNNR TERVDHDETI SIGDNRREDV GIDETVSIGK NRTKTIGRNE KDKIGNNWSI KVGKMKTETI GIAYMQNVGV GRMENVGVAY NLNVGAVMAT VVGSTQTTMV GSDRSVKVGS NQNTDVGTKY TLTVGGGGGG AGAPAAGGAK NIVASSPQGG GGGGGGSSIT MDAESITLKV GASTLILQAD GTITANGESI KLIGASDVTT NSGGIHEN
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