| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2725 |
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| Symbol | |
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| ID | 4665247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2991675 |
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| End bp | 2993375 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823924 |
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| Product | Type II secretory pathway component PulD-like protein |
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| Protein accession | YP_971067 |
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| Protein GI | 120611389 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATG AACGACGTGG TCGACGCCTC GTCTGCGGGC TCGTGGCCAC GACCTTGGTA
CTGCAGGCCT GCTCCACCAT TCAGGAGACG GAAGCGAACG CGCAGAAAGC GCGGGAGCAG
ACACGCCGCA TTTTGGACGA GCGTACCGCC CAGGGAGCAC CCGCCGGCGT GACCCGGCTG
GCGGGCCCGC GCATCGCCGG GCGGGAAATC AAGCTCGTCA AGAAGGAGGC GCTGCCCGAC
ATCTTCGACG CAGAGATCGG CTATGCGAGC CATGGAACGC AGCGCCTGAG CGAAGTGCTC
GAAGAACTCG GTGCACGAAC CGGGATGGCG ATCTCGTCCA CTGAGATCGC GAGCATGCCG
CGTACCGGAC AGGCCGCGCA GGCGAGCGCC GGCAGCGAGC AGCCCATCAC CGCTTACGTT
CAGGTCGAGT TCAGCGGGAA GGTCCGCAGC CTTTTCGACG ACCTGGCACA GCGCGCCGGC
GCCAGCTGGC GGTACGTGAA GTCGACGAAC TCGGTGCAGT TCTACCGATT CGAGACACGC
ACATACCCGA TGCACCTCCC ATCCGGAGCC AAGTCGCTGC AGGCGGCGAT CAGCCTGTCG
TCCACGAGCT TGAGCAGCGG TGGCGGCAGC GGCTCGGCCG GAGGCGCGAC AGGCGCGGGC
GGCTCGTCTG GAGGAGCCGG AGGCGGCGGA AACGTATCGG TGACGCAGAG CCAGGTCATC
GACCCATGGA CGTCGATCAT GGCGTCGGTG CAGGCCATCC TGGGTGCGAG CCAGGACACG
ACGGCCACCG GCCGCGCTGT GCCGGCGCTG GCCGCGGGCG CCAGCGGTGC AGCGCCTGCC
GCAGCGAGCA AGCTCTCCGC ATCCGGACTG GATGGCTTCG CGACGGCCGC GCCTGAGCTC
GGCATCGTCA CCGTCACGGC AAGGCCACTC AGCCAGGCCC GCATTGCAGC CCTCCTCCAC
TCGATCAACC AGCGTTTCGC GCGCAACCTC CTCATCGACG TGACGATCTA CAACGTCTCG
ATGACCAAGG AGGAGACTGC CGGCGTGTCC ATGGACCTGG TGTACCGGCG CCTCAACGGC
AATGGAGTGG GCGTTGCCGG CGCGGCGCCG CTGCAGCCAG CGAACGGCCA GCCCGGGCGC
ATCACCCTGA GCTTCTCCGA CCCCGCTTCG CGTCTGGCCG GCTCGCGCAT GGTTGCCGAA
GCACTCCAAT CCGTAGGCAA CGTGGCGCTC TACAAGAAGG GCCAGTTCAT GGCCATCAAC
GGCCAGCCCA GCCCGTTCCA GGTGGTTGAT GACGAGGAGT ACAACACATC GGTGTCGGCC
ACTCAGACCG CCAATGTAGG CACACAACTC GCCACGCAGA AGGCCGTGCT CACCACGGGC
CTTACCGGCA ACGTGCTGCC GCTCATCCTG GGGGACAACC GGATCCTGTT GCAGTACCAG
ATGGAGATCA GCGCGGTCAG CAACATGAAC CCGGCGGTGG TCAACGGCAT CCTGACCTAC
TCCCCCAAGC GCTCGCGCCA GAGCTTCCAG CAGCAGGCGT TTCTGAAGGA TGGCGATGCC
ATCGTGCTCT TCGGCTACGA CAGCGGCGGC GACGAGGCCG CGGGCCAGGT GTCGCTCTCG
GGCGGCAGCA AGCGGGGCAG CGGCGACCGG ACCATGTCCG TGATCGTCAT GCAAGTCTTC
GGGGGGCAGA AAAATGGCTG A
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| Protein sequence | MKNERRGRRL VCGLVATTLV LQACSTIQET EANAQKAREQ TRRILDERTA QGAPAGVTRL
AGPRIAGREI KLVKKEALPD IFDAEIGYAS HGTQRLSEVL EELGARTGMA ISSTEIASMP
RTGQAAQASA GSEQPITAYV QVEFSGKVRS LFDDLAQRAG ASWRYVKSTN SVQFYRFETR
TYPMHLPSGA KSLQAAISLS STSLSSGGGS GSAGGATGAG GSSGGAGGGG NVSVTQSQVI
DPWTSIMASV QAILGASQDT TATGRAVPAL AAGASGAAPA AASKLSASGL DGFATAAPEL
GIVTVTARPL SQARIAALLH SINQRFARNL LIDVTIYNVS MTKEETAGVS MDLVYRRLNG
NGVGVAGAAP LQPANGQPGR ITLSFSDPAS RLAGSRMVAE ALQSVGNVAL YKKGQFMAIN
GQPSPFQVVD DEEYNTSVSA TQTANVGTQL ATQKAVLTTG LTGNVLPLIL GDNRILLQYQ
MEISAVSNMN PAVVNGILTY SPKRSRQSFQ QQAFLKDGDA IVLFGYDSGG DEAAGQVSLS
GGSKRGSGDR TMSVIVMQVF GGQKNG
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