Gene Aave_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2706 
Symbol 
ID4666769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2973113 
End bp2973811 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID639823907 
ProductyecA family protein 
Protein accessionYP_971050 
Protein GI120611372 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.179188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA TGACGCAACA ATCCTTGAAC GATGCCGAAC TTGATCGGTT GGGCGACTTT 
CTCGAAGGAG TCGGCGCACC TGCAATGAAT CTCGAAATGC TCGATGGGTT CTTTGCCGCA
CTCATTTGCG GCCCTGAAAC GGTATTGCCC AGCGAATACT TGCCACAGGT ACTTGGGGAA
GGCCATTGCT TCGACAGCAA TGACCAAGCC GCGGAGATTC TTGGCTTGGT CATGCGGCAT
TGGAACACGA TTGCATCAGA ACTGTTCCGC ACTCTGGAGA AAGACGATGT CTACCTCCCC
GTGCTGCTCG AAGATGCGGA TGGGGCCGTA CACGGCAATG ACTGGGCACG TGGTTTCATG
CGCGGCATTC AATTACGGCC CAATAGTTGG CAAGAGCTGA TCGGCAGCGA CGAGTTTGGC
GGGCCAATGC TGCCAATTAT GATTTTGACC TATGAACATG ATCCTGATCC CGCCATGCGC
CCGCCAGAGA TTGCGCCGGA CAAACGCGAT GAGTTGCTTC AGTCCCTGAT TGCCGGACTT
ACACACATCT ATCGCTACTT CGCGTCACAT CGCCAATTGG CAACCCACGT GCCTTTACGC
AGGCAAGGCC CTAAAGTTGG GAGAAACGAT CAATGTCCAT GTGGCAGTGG GCGGAAGTAC
AAGCATTGCT GTGCTACCGG CGGGCCAATA TTTCATTGA
 
Protein sequence
MQQMTQQSLN DAELDRLGDF LEGVGAPAMN LEMLDGFFAA LICGPETVLP SEYLPQVLGE 
GHCFDSNDQA AEILGLVMRH WNTIASELFR TLEKDDVYLP VLLEDADGAV HGNDWARGFM
RGIQLRPNSW QELIGSDEFG GPMLPIMILT YEHDPDPAMR PPEIAPDKRD ELLQSLIAGL
THIYRYFASH RQLATHVPLR RQGPKVGRND QCPCGSGRKY KHCCATGGPI FH