| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2689 |
|---|
| Symbol | |
|---|
| ID | 4667632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2958002 |
|---|
| End bp | 2958730 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639823892 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971035 |
|---|
| Protein GI | 120611357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.40181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTG CACAACAGCA ACCCCGTGAG TTTTTCAACC TGCACACCAG CGGTATCGGT
TACCTCAACC GTATTCGCTG GGTGGAAACC AAAGGTCGTG GACGTAAGGC GGAATCGTTC
CTCGCGTGCA GTATTTCTGC ATTGCGTGGC TCTTCGGATG CTGCCGACTA CACGTATTTC
GATCTTCGGG TCAGCGGTGA GGAAGCGATT GGATTGATCG ACGGTCTCCA GCAAGAAGTG
CACGATCGCT GCAAGGTGCT CGTGAGCTTC AAGATCGGCG ACATCTATCC GCATCTTTAC
GAGCGTGACG TGCGTGACCA GCAGTCCGGA CGTCCCACGG GACATAAGGA AATGGCCACG
CTCATCAAGG GCCGGCTCAT CCTGATCAAC TCCATTTCGG TGGACGGCGA GAAGGTGTAC
AGCAGGCCCT CTGACGAAAG CTCGGGCCAT GAAGGTGAAC AGTCGCAGGG CGACGATCAC
CCGATGGACG GCGACGCTTC CGACTCCACG CAATTCGAGC GCTCCGCGCG CGAAGAGATG
GAGCAGGAAG CGCCTCCCCC GCGTCGTTCG GTCGCACCGC AACCGCGGAC GACCGTTACG
CCGATGCCGC AGCGCCGCAA CCGCGGGCTG AAGCACCGGC GCCGCAACGT CGGCAGCCTC
TTCGCTCCAT CGCGAGCGGC AGGCAACCAC GTGCTGAGCA CCGCGAACCC GCGGAAGCCT
GAGCACTGA
|
|---|
| Protein sequence | MQTAQQQPRE FFNLHTSGIG YLNRIRWVET KGRGRKAESF LACSISALRG SSDAADYTYF
DLRVSGEEAI GLIDGLQQEV HDRCKVLVSF KIGDIYPHLY ERDVRDQQSG RPTGHKEMAT
LIKGRLILIN SISVDGEKVY SRPSDESSGH EGEQSQGDDH PMDGDASDST QFERSAREEM
EQEAPPPRRS VAPQPRTTVT PMPQRRNRGL KHRRRNVGSL FAPSRAAGNH VLSTANPRKP
EH
|
|---|
| |