Gene Aave_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2666 
Symbol 
ID4666818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2926292 
End bp2926828 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID639823869 
Producthypothetical protein 
Protein accessionYP_971012 
Protein GI120611334 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0525575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.279005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TGATCGACCA TCTGTCGCAG TACGCGGACT ACCACCGCGA TCCGCGCAAT 
ATCCAGACCC ATTTCGTCGG TGTGCCCATG ATCATGCTGG CCGTCACGGT GCTGCTGTCG
CGTCCGGCGT GGCAGGCCGC CGGCCTGCTG CCGGTGTCGC CCGCCCTCGT TGCGGCGCTG
GCCGCCAGCC TGTTCTATTT CCGGCTCGAT GCGCGCTACG GGCTCGCGAT GGCCACGGTG
CTGGCCGCCA TGCTGGCCGT GGGCCAGTGG CTGGCGGGGC AGGGTACCGC GCTGTGGCTG
GGTGCGGGCC TGGGCCTGTT CGTGGTCGGC TGGGTGATCC AGTTCGTGGG CCACTATTAC
GAGGGCCGCA AGCCCGCCTT CGTGGACGAC CTCGTGGGCC TGATCGTCGG GCCGCTTTTC
GTGGCGGCCG AGATCGGCTT CGCGCTCGGG CTGCGTCGCG AGGTGCAGGC GGCGGTCGAG
GCGCGCTCGG GCCCGGTGCG CCTGAACGAG CGGCCGGGCC GGCCGGCGCG GGCCTGA
 
Protein sequence
MKTLIDHLSQ YADYHRDPRN IQTHFVGVPM IMLAVTVLLS RPAWQAAGLL PVSPALVAAL 
AASLFYFRLD ARYGLAMATV LAAMLAVGQW LAGQGTALWL GAGLGLFVVG WVIQFVGHYY
EGRKPAFVDD LVGLIVGPLF VAAEIGFALG LRREVQAAVE ARSGPVRLNE RPGRPARA