Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2644 |
Symbol | |
ID | 4665299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2906537 |
End bp | 2908642 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639823847 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_970990 |
Protein GI | 120611312 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.418663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00818484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGGCA GTTCCCTGTC ACCAAATGTT AGTGGCGCCG CGCGCCCAGC AGGGGCTGGC GACCCCCGTA GAATCCCGCG GATGTCCTAT CTCGTGCTCG CCCGCAAATA CCGCCCCAAG ACCTTCTCGG AGATGGTCGG GCAGGAACAT GTGGTGCAGG CGCTCTCGAA TGCGCTGGTC CAGCAGCGCC TGCACCATGC GTACCTGTTC ACGGGCACGC GCGGGGTGGG CAAGACCACG GTGTCGCGCA TCCTGGCCAA GTCGCTCAAC TGCCAGGGCG AGGACGGGCA GGGCGGCATC ACCGCCACGC CCTGCGGCGT ATGCCAGGCC TGCCGGGACA TCGATGCCGG CCGCTTCGTG GATTACACCG AGCTCGATGC CGCCTCCAAC CGCGGCGTGG ACGAAGTGCA GGGCCTGCTG GAGCAGGCCG TGTACAAGCC GGTGCAGGGC CGCTTCAAGG TCTTCATGAT CGACGAGGTC CACATGCTCA CGAACACCGC GTTCAACGCG ATGCTCAAGA CGCTGGAGGA GCCGCCCGAA TACCTGAAGT TCGTGCTGGC CACGACCGAC CCGCAGAAGG TGCCGGTCAC CGTGCTCAGC CGCTGCCTGC AGTTCAACCT GCGGCCCATG GCGCCGGAAA CCGTGCTGGA GCACCTCACC CGGGTACTCG CCCGGGAAAG CGTGCCGGCC GAGCCGCAGG CGCTGCGGCT GCTGGCGCGC GCGGCCCGCG GTTCCATGCG CGATGCGCTG TCGCTCACCG ACCAGGCCAT CGCCTTCGGC AGCGGCCAGC TCCAGGAAGC CGGCGTGCGG CAGATGCTGG GCAGCGTGGA CCGCAGCTAC GTGTTCCGCC TCATCGATGC GCTGGCGCGC GGCGACGGCC GCACGGTGGT GGAGACTTCC GAATCCCTGC GCATGCACGG GCTTTCCGCC GCCTCCACGC TCGAGGAAAT GAGCGCCGTG CTGCAGCGCA TGGCCGTGTT CCAGGCCGTG CCCCAGATGG CAGACGTCGT GGACCCGGCC GATCCGGAGG CCTCCGAAAT CGCGCGGCTG GCCGGCACGC TGCCCGCCGA CGAGACGCAA CTGCTCTACA GCATCTGCCT GCACGGACGC ACGGAACTCG GCCTCGCGCC CGACGAGTAT GCGGCCCTCA CCATGGCGTT GCTGCGGCTG CTGGCCTTCA AGCCTGCCGC GGAGGGCGGA ACGCCCCCGG CGGAAAAAAA AACACTGAAA CCGCCCCAGG CGCAGCCTCC GGCGCCTGAG CCGGAGCCGG CATCCGCCGC GGAACCTGTA CCTTCCATCG CCGCATCCGG GGCGGTCTCC GCGCCTGTGG AGCCCGCCAC CGCGGCACCG CCCGGGCCGG AGCCCCGGCC TGCCGAAGCG CACGCGCCCG AGCCCGAGCC GCATTCCCCC GCGCCGCTGG AGCCCCCCTC CGGCGAGGCC CCCTGGGCGG ACGATGCCCC CCCCCCGGCC GCGGTCGCCG CCACGGCGGC ACCGGCCCCC GTGCAGGAGC CGTCGTCCAG CGCCGCCGTG GCGGCGGCCG TGCGCCTGCC GGTCAGGACG CCGGCCGACC TGCAGGCGCA CCGGCCTGCC GAGGTCGCGC TACCTGCCGC CAGCACCCCC GATTTCGTGG CCATTCCCGT GCGGGTCGCG CCGGAGCCTG GCATGCGGCT GCAGCCAGCG GCCGCGCCCG GCGCCCTGCC GGCCTCGGCC CGCTACACGC CGACGGAAGA GGGCGATGTC TGGCATGCCA CCGTGATGCA GCTCGTCGCG GCCGAGGCCA TCAATGCCCT GGTGCGCGAA CTCGCGCTGC AGTCCCAGCT GGTGGCCCGC GACGCCGACC ACTGGCTGCT GCGCGTGGAG CGCGAGTCGC TCAACCAGCC CACGGCCCGC GAGCGCCTGC GCGCCGCGCT GGAGGCGGCC GGCTTCGCCC GCCAGATCAG CGTGGAGGTG GGCACGGTCA TCGACAGCCC CGCGCGGCGC AATGCCCATG CGGCCGCGGA GCGCCAGCGG CGCGCGCAGG AGATCGTGGA AAACGATCCC TACGTGCAGG CGCTGGTGCG GGACTTCGGG GCGAGAATCG TTCCTGGCAG CATCAAACCC GCATGA
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Protein sequence | MPGSSLSPNV SGAARPAGAG DPRRIPRMSY LVLARKYRPK TFSEMVGQEH VVQALSNALV QQRLHHAYLF TGTRGVGKTT VSRILAKSLN CQGEDGQGGI TATPCGVCQA CRDIDAGRFV DYTELDAASN RGVDEVQGLL EQAVYKPVQG RFKVFMIDEV HMLTNTAFNA MLKTLEEPPE YLKFVLATTD PQKVPVTVLS RCLQFNLRPM APETVLEHLT RVLARESVPA EPQALRLLAR AARGSMRDAL SLTDQAIAFG SGQLQEAGVR QMLGSVDRSY VFRLIDALAR GDGRTVVETS ESLRMHGLSA ASTLEEMSAV LQRMAVFQAV PQMADVVDPA DPEASEIARL AGTLPADETQ LLYSICLHGR TELGLAPDEY AALTMALLRL LAFKPAAEGG TPPAEKKTLK PPQAQPPAPE PEPASAAEPV PSIAASGAVS APVEPATAAP PGPEPRPAEA HAPEPEPHSP APLEPPSGEA PWADDAPPPA AVAATAAPAP VQEPSSSAAV AAAVRLPVRT PADLQAHRPA EVALPAASTP DFVAIPVRVA PEPGMRLQPA AAPGALPASA RYTPTEEGDV WHATVMQLVA AEAINALVRE LALQSQLVAR DADHWLLRVE RESLNQPTAR ERLRAALEAA GFARQISVEV GTVIDSPARR NAHAAAERQR RAQEIVENDP YVQALVRDFG ARIVPGSIKP A
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