Gene Aave_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2615 
Symbol 
ID4668214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2865639 
End bp2866115 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID639823818 
Producthypothetical protein 
Protein accessionYP_970961 
Protein GI120611283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.53221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.655008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAA TCCAATTGAC CCCCGCGGAG CGCCGGGAAC ACCGCGCCAA CGCCCACCAC 
CTGGACCCCG TGGTGATGAT CGGCGGCGAC GGCCTCACCG CAGCGGTCCA GAAAGAGGTC
GATGCCGCGC TGTCGGCCCA CGGCCTCATC AAGGTGCGCA TTCTCGGCGA CGACCGGGCC
GCGCGCGAGC AGATCTACCA GCAACTGGCC GACGAACTGA ATGCCGCGCC GATCCAGCAC
ATCGGCAAGC TCATCGTGCT CTGGCGCCCT CCGGTGAAGA AGGACAAGGC GATCGACGAA
GACCGCATGC CCGGCCCGCG CGACGTGAAG GTCCTCAAGT TCAGCAAGCG CGGCGGCCAG
CGGCCGGAAG TGAAGCAGTT GCGCGTGCTC GGCAACCAGC GCCTGACGCC CGGCGGCCAG
ATCAAGCGCG CCAAGAAACC GAAGCAGACT TCCGTGAAGA AGCGGCAGGC GGATTGA
 
Protein sequence
MPQIQLTPAE RREHRANAHH LDPVVMIGGD GLTAAVQKEV DAALSAHGLI KVRILGDDRA 
AREQIYQQLA DELNAAPIQH IGKLIVLWRP PVKKDKAIDE DRMPGPRDVK VLKFSKRGGQ
RPEVKQLRVL GNQRLTPGGQ IKRAKKPKQT SVKKRQAD