| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2608 |
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| Symbol | |
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| ID | 4668910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2856755 |
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| End bp | 2858218 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639823811 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_970954 |
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| Protein GI | 120611276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.737465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTC AGGCCACGCC CGCGACACCC GATCCCGCGG GGCACGACCA TCTGCAGCGC
AACCTCACCA ACCGGCACAT CCAGCTCATC GCCATCGGGG GCGCGATCGG CACCGGCCTT
TTCATGGGCT CGGGCAAGAC GATCAGCCTC GCGGGCCCGT CCATCGTGTT CGTGTACATG
GTGATCGGCT TCATGCTGTT CTTCGTGATG CGCGCCATGG GCGAGCTGCT GCTCTCCGAC
CTGCGCTACA AGTCCTTCAT CGATTTTTCC GCCGACCTGC TCGGGCCCTG GGCCGGGTTC
TTCACCGGCT GGACCTACTG GTTCTGCTGG ATCGTCACGG GCATCGCCGA CGTGATCGCG
ATATCGGCAT ACACCCAGTT CTGGTTTCCG CACATCCCGC AGTGGGCGCC GGCCCTGGGC
TGCGTGGGGC TGCTGCTCTC GCTCAACCTC CTCACTGTCA AGCTCTTCGG CGAGATCGAA
TTCTGGTTCG CCATGGTCAA GATCGTCGCC ATCGTGGCGC TGGTGGCCAC CGGCCTCTAC
ATGGTGGGCA CGGACTTCGT CGCCCCGGCG GGGCACGAGG CCAGCCTGAG CAACCTCTGG
AACGACGGCG GCATGTTTCC CCACGGGCTG ATGGGCTTCT TCGCGGGCTT CCAGATCGCG
GTGTTCGCCT TCTCGGGCAT CGAGCTGGTC GGCACCACCG CGGCGGAGGC GCAGGACCCG
GAGCGCAGCC TGCCGCGGGC CATCAACTCC ATTCCCTTGC GCATCATCGT CTTCTACGTG
CTGGCGCTGG TCGCCATCAT GGCGGTCACG CCATGGCGCG AGGTCGTGCC CGGCAGGAGC
CCGTTCGTGG AGCTGTTCGT GCTCGCAGGG CTGCCGGCCG CTGCAGGCGT CATCAACTTC
GTCGTGCTGA CCTCGGCGGC CTCGTCCGCC AACAGTGGCG TGTTCTCCAC CAGCCGCATG
CTCTACGGAC TGGCGCTCAA GGAGGACGCA CCCCGGGCCT TCCGCCACCT GTCGAAGCAG
AGCGTGCCCT CGCGCGGCCT GCTGTTCTCG TGCACCTGCC TGCTGGCGGG TGCCCTGCTG
ATGTGGGTGA TTCCCGACCT CGTGGAAGCG TTCACCCTGG TCACCACCGT GTCGGCCATC
CTGTTCATGT TCACCTGGTC GCTGATCCTG CTGTCCTATA TCGCCTACCG GCGCAACCAT
CCGGAACGGC ACGCCGCGTC CATCTACAAG ATGCCCGGCG GCGCGGCGAT GTGCGCGGTC
TGCCTGGCGT TCTTCGTGTT CATCCTGGGG CTGCTGGCGC TGGAATCGGA CACGCGCAAG
GCGCTCATCG CGACCCCGCT CTGGTTCGTG CTGCTGGGGG CGGCCTACAG CCTGCTGCGC
CCCGGTTCCC GCCGGGCGGC CGTGCTGGAC GCCGAGGCGG GGATGGCCCC GGGCTCGGTG
CCCGGACCGG CTTCCAGCCG CTGA
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| Protein sequence | MTPQATPATP DPAGHDHLQR NLTNRHIQLI AIGGAIGTGL FMGSGKTISL AGPSIVFVYM
VIGFMLFFVM RAMGELLLSD LRYKSFIDFS ADLLGPWAGF FTGWTYWFCW IVTGIADVIA
ISAYTQFWFP HIPQWAPALG CVGLLLSLNL LTVKLFGEIE FWFAMVKIVA IVALVATGLY
MVGTDFVAPA GHEASLSNLW NDGGMFPHGL MGFFAGFQIA VFAFSGIELV GTTAAEAQDP
ERSLPRAINS IPLRIIVFYV LALVAIMAVT PWREVVPGRS PFVELFVLAG LPAAAGVINF
VVLTSAASSA NSGVFSTSRM LYGLALKEDA PRAFRHLSKQ SVPSRGLLFS CTCLLAGALL
MWVIPDLVEA FTLVTTVSAI LFMFTWSLIL LSYIAYRRNH PERHAASIYK MPGGAAMCAV
CLAFFVFILG LLALESDTRK ALIATPLWFV LLGAAYSLLR PGSRRAAVLD AEAGMAPGSV
PGPASSR
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