Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2598 |
Symbol | |
ID | 4669178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2844696 |
End bp | 2846867 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639823801 |
Product | TonB-dependent receptor |
Protein accession | YP_970944 |
Protein GI | 120611266 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00053771 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.180731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGCG TGCCCCCTCC CCCAGGCCGC GCGGCCCCCT CCCCTCCGCC ATCCGCCCCC TCCGGCCCTG CCGCCGCCCG CGCTTCGGCG CCGGTCTGGG CGGTCGTGGC CGGCTGCGCC CTGTGGGCGG GCATCCCGCC GGAAGCGGTG GCCCAGGCCG CCGGCCCCGA TCCCGAGCTG CCGGCCGTCG AAGTGTCCGG CGGCCAGGCG GCCGCCCAGC GCCGCTTCGA TGCCGCCGCG AGCCATACGG CCATCTCCCT GGACCCCTTC ACGGCCACCA CACCGCTCGT GAACCTGTCC GAACTGCTGG CCGGCCAGCC CGGCGTGGCG GTGTCCGACC GCCAGAACTA CGCGCAGGAT CTCCAGATCG CGGTGCGAGG CTTCGGGTCG CGCTCCACGT TCGGCGTGCG GGGCGTGCGC ATCCTCGTGG ACGGCATCCC GGCCACGATG CCGGACGGCC AGGGCCAGGC CGCCACGGCA CAGCTGCCGT CCGCGTCCCA GGTGGAAGTG CTTCGCGGGC CGCTCGCCCA GCAGTACGGC AATGCGGCGG GCGGCGTGCT GCAGGTCACC ACGCGCGATC CGCGGGAAGG CGGCGGGGCT TCGGCCTCGG TGGCCGCGGG ATCCTACGGC CAGCGCATGG CCGAGGCATC GTTCGACGCG GGCGACCGCA TCCTGGGCGG GCTGGTGGAC ATCTCCCGCT TCGAGACCGA CGGCTGGCGG GACCACGGCG CCGCCCGCCG CACGCACCTG AACGCCAAGG TCGTGGCACG TCCCTCTGGC GACACCCGCG TCACGGTGCT GATGAACCTG TTCGACCAGC CGCTGGCGCA GGACCCGCTG GGCCTGACGC GCGAGCAGTG GCGGGCCGAT CCCCGCCAGG CCCCGGCGGT GGCGTACAGC TTCGACACCC GCAAGACCGT GCGGCAGAAC CAGCTCGGCC TGGTGGTGGA GCACGCGCTG AACGCCACGG ACAGCGTGCG CGCAAGGCTC TACGGCGGCA TCCGCAGCCT GTTCCAGACC CTGTCCTTCT CCGGCGCGGC CGCCAGCAGC GCCGGCGGCG TGGTGGACCT GGACCGCGAC TACTACGGCC TCGGAGCCGC CTGGACGCAC AGCGACCGCA CGGCCGCCGG CCTGCCCTGG TCCTGGACGG TGGGGTTGGA CGCCGACCGG CTCTCCGAAC ACCGCCAGGG CTTCGTCAAC GATGCGGGCG TGCCCGGCGC GCTGCGGCGC GACGAGCAGG ACCGCGCCGG CAACACCGAC CTCTTCGCCC AGGTGGACGC CTGGATCGCC CCCACCGTGC GCGCGATCGC GGGGCTGCGC GCGACGCGGG TCCGGCTGGC CGTGGACGAC CGCTTTCCGG CCAGCGCCGC CAATCCGGAC GACAGCGGCG AGCGCACCTG GCGTGGCACG AGCCCGGCCG TGGGCCTGGT CTGGGCCGCT TCGGAGCACT TGAACCTGTA TGCCAATGCC GGCGGAGGCA TCGAAACGCC CACGCTGGCC GAGATGGCCT ACAGCCGCAC CAACAGCGGA CCGAACTACG GGCTGGAGGC CGCGCGCAAC CGCCAGTTCG AGGTGGGCGC CAAGTGGCAG GACGGGGTGC ACCGCCTGGA GGCCGCCTGG TTCGATGCCC GCACGCGCGG AGAGATCGTT CCCGCGGCAA CCGTCAATGG CCGCACGGTG TACCAGAATG CCGACCGCGT GCGCCGCCGC GGCATGGAGC TGGGCTGGAG CGCGCGCATG GGCGCATTCG TCCCGCGGGC CGCCTACACC TACCTGGACG CCTTCTTCGC CAGTCCCTAT ACCGGCGCGG GCGGCGTGGC GGTGCCTTCC GGCAACCGCC TGCCGGGAAC GGCGCGCCAC ACGGCCCGCC TGTCGCTGGA TTACGCGCCC GACGCACGGT GGACGCTGGG CGGCGCGGTG GACTTCTCCT CCCGGGTGCA GGCCAACGAC GCCAACACCG AGGCGGCTCC CGGCCGTGCC GTCGCCGGAC TGCACGCGGG CTACGGATGG AAGACCGGAG GCACCGTGCG CTGGCAGGCC TGGGCGCGGC TGGACAACCT GTTCGACCGC CGCTATGCAG GCTCGCTGAT CGTCAACGAC GGCAACGGCC GCTTCTTCGA GCCCGCGGCC GGCCGGCGCA TCATGGTGGG GCTGCGCGCG CAGCTGCCCT GA
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Protein sequence | MRGVPPPPGR AAPSPPPSAP SGPAAARASA PVWAVVAGCA LWAGIPPEAV AQAAGPDPEL PAVEVSGGQA AAQRRFDAAA SHTAISLDPF TATTPLVNLS ELLAGQPGVA VSDRQNYAQD LQIAVRGFGS RSTFGVRGVR ILVDGIPATM PDGQGQAATA QLPSASQVEV LRGPLAQQYG NAAGGVLQVT TRDPREGGGA SASVAAGSYG QRMAEASFDA GDRILGGLVD ISRFETDGWR DHGAARRTHL NAKVVARPSG DTRVTVLMNL FDQPLAQDPL GLTREQWRAD PRQAPAVAYS FDTRKTVRQN QLGLVVEHAL NATDSVRARL YGGIRSLFQT LSFSGAAASS AGGVVDLDRD YYGLGAAWTH SDRTAAGLPW SWTVGLDADR LSEHRQGFVN DAGVPGALRR DEQDRAGNTD LFAQVDAWIA PTVRAIAGLR ATRVRLAVDD RFPASAANPD DSGERTWRGT SPAVGLVWAA SEHLNLYANA GGGIETPTLA EMAYSRTNSG PNYGLEAARN RQFEVGAKWQ DGVHRLEAAW FDARTRGEIV PAATVNGRTV YQNADRVRRR GMELGWSARM GAFVPRAAYT YLDAFFASPY TGAGGVAVPS GNRLPGTARH TARLSLDYAP DARWTLGGAV DFSSRVQAND ANTEAAPGRA VAGLHAGYGW KTGGTVRWQA WARLDNLFDR RYAGSLIVND GNGRFFEPAA GRRIMVGLRA QLP
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