Gene Aave_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2579 
Symbol 
ID4668444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2827104 
End bp2827535 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID639823782 
ProductMerR family transcriptional regulator 
Protein accessionYP_970925 
Protein GI120611247 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.136218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.025304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG CCGAGGTGGC CAGGCGCTCG GGGGTGCCTG CGTCGGCACT GCGTTACTAC 
GAAGGGAAGG GGCTGATCGC GTCCGTCGGC CGGCAGGGCA TCCGGCGTGT GTTCGGCCCC
GATGTGCTGG AGCGGCTCGC GCTGATCGCG CTGGGGCGCA GCGCAGGTTT CTCGCTGGAC
GAGATTTCAC GCATGTTTGC GCCCGACGGC AAGCTGGCCA TCGATCGCCG GATGCTGCTG
GCCAAGGCGG ACGACATCGA CCGCACGATC CTGAAATTGC GTGCGATGAG CGAAGGGCTG
CGGCATGCGG CCGTATGCCC GGCTCCTTCG CACATGGCAT GCCCGTCGTT TCAGCGGCTG
CTGCAGAAAG CTTCGGCCCA GGCCGCGCCC CGTAGCGGGC GGCGCGGGGC GGCGAGTCCC
ATGGACTCTT GA
 
Protein sequence
MEIAEVARRS GVPASALRYY EGKGLIASVG RQGIRRVFGP DVLERLALIA LGRSAGFSLD 
EISRMFAPDG KLAIDRRMLL AKADDIDRTI LKLRAMSEGL RHAAVCPAPS HMACPSFQRL
LQKASAQAAP RSGRRGAASP MDS