Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2578 |
Symbol | |
ID | 4668421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2825716 |
End bp | 2826996 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639823781 |
Product | major facilitator superfamily transporter |
Protein accession | YP_970924 |
Protein GI | 120611246 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0148068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGA ACCCCATCGA ACCGCAATTC CCCGCCGATG CAGTACGGCA GCCCTCCTCC CCATGGCGCG GCGCCACGGC CAGCCTGGCA CTGTCCATGT TGCTGGCCTC GCTGGGAACC AGCATCGCCA ACATCGCGTT GCCTGCGCTG GCCGGTGCCT TCGCACGGCC CTTCCCGCAG GTGCAGGCGG TCGTCGTCGC CTATCTCGCA GGGCTGACCG TTTCGGTGCT CATCGCAGGC CATCTGGGAG ATCGCCACGG CCTCAAGCCC ACGCTGCTCG CGGGCCTTGC CCTGTTCGCC ACCGGAGCGC TGCTCTGCGG CATCGCGCCA AGCCTCGGAC TGCTCACCGC GGCCAGGGTG CTGCAGGGCG TCGGCGCGGC CTTCCTGATG ACGCTGTCCA TGGCGCTCAT GCGCGAAACC GCGGATCCGG AACGGCTGGG CCGGGCCATG GGCATGCTGG GTACGGTGTC GGCAATCGGA ACGGCCCTCG GCCCCTCGCT GGGCGGCATG CTGGTATCGA CGGCGGGGTG GCGCAGCATC TTCCTGGTGC AGGTGCCGCT GACGCTCCTG GCGGGAGCCC TGACCTTCTC CTGGCTGCCC CATGGCGGGC CCGGGCGCGC AGGGCCTAAG CCATCCTGGA TGCACGCCCT GGACCGGCGC ATGGTTTCCC CGCTCCTGGT CAATGGATCG GTTGCGGCGG TCATGATGGC GACGCTCGTG GTCGGCCCGT TCTACCTGGG CACGGGCCTG GGCCTCAAGG AAACGCAGGT GGGCCTGGTG ATGGCGGTGG GGCCCGTGAT CTCGATCTTC GGCGGGATTC CTGCGGGCCG GAGGGTCGAT GCCTGGGGAA GCCGGAAGGT GCTCGCGATA GGCCTGGGCC TGCTGGCCTG CGGAGCCTTC CTCCTGTCCC TGCTTCCCGG ATGGATCGGC GTGGCCGGCT ACCTGCTCGC CATCGCGGCC CTGACGCCCG GCTACCAGCT GTTCCAGGCC GCCAACAACA CGGCGATGCT GGCCGATGTC CCGCAGAACC GGCGCGGCAC GGTTTCGGGA CTGCTGGGCC TTTCGCGGAA CCTGGGCCTG ATCGCGGGAG CCTCCTTGAT GGGCTCCGTC TTCGCGTTCG GCGCAGGCAC GGCCGACCTC CGCCACGCCA CCCCGCAGGC CATGGCCGAC GGACTGCGGC TGACGTTCGC GGTAGCGGGC ATCGGGATGC TGGTGGCGAT CGCCATCTCG TTCTCCTGGT CCGGTGGGCG CCGCAAGGGC AACGGACCCA CTGGTCCATG A
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Protein sequence | MAMNPIEPQF PADAVRQPSS PWRGATASLA LSMLLASLGT SIANIALPAL AGAFARPFPQ VQAVVVAYLA GLTVSVLIAG HLGDRHGLKP TLLAGLALFA TGALLCGIAP SLGLLTAARV LQGVGAAFLM TLSMALMRET ADPERLGRAM GMLGTVSAIG TALGPSLGGM LVSTAGWRSI FLVQVPLTLL AGALTFSWLP HGGPGRAGPK PSWMHALDRR MVSPLLVNGS VAAVMMATLV VGPFYLGTGL GLKETQVGLV MAVGPVISIF GGIPAGRRVD AWGSRKVLAI GLGLLACGAF LLSLLPGWIG VAGYLLAIAA LTPGYQLFQA ANNTAMLADV PQNRRGTVSG LLGLSRNLGL IAGASLMGSV FAFGAGTADL RHATPQAMAD GLRLTFAVAG IGMLVAIAIS FSWSGGRRKG NGPTGP
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