| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2570 |
|---|
| Symbol | |
|---|
| ID | 4668124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2820424 |
|---|
| End bp | 2820948 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639823773 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970916 |
|---|
| Protein GI | 120611238 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1430] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0323934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00196515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACC CACCTGCCAT GAACCACGAT CTCCCGTCCG GACCGATGCC CCGCCCCCTT
CGCCGAATGG CGGTTTCCCT GGCTCTCGTC GCGGCCTGCC TCGGCACCGC CCAGGCCCGG
GCACAGGAAG GGCCGCAGCT CGACCTGCAG CGGGTGGACC TGGCCGCAGG CATGCACCGC
ATCGACGCGC AACTGGCGGT GACGCCCCAG GAGCGCGAGA CCGGCCTCAT GCACCGCAAG
GACATGCCCT CCAACGAAGG CATGCTGTTC GTGTTTTCGG TGCCGGCCGT GCAGTGCTTC
TGGATGAAGA ACACCCTGCT GCCGCTCACT GCAGCCTTCG TGGCGGACGA CGGCACCATC
GTCAACCTGG CCGACATGAA GCCGCAGACG CTGAATTCCC ACTGCTCCGA AAAGCCCGTG
CGCTTCGTTC TGGAGATGAA CCAGGGCTGG TTCGCCAAGC GCGGCATCAA GCCTGGCTTC
AAGCTGTCCG GCGCCCCGTT CGCCAGGCCA TCGCCAGCAC GTTGA
|
|---|
| Protein sequence | MDDPPAMNHD LPSGPMPRPL RRMAVSLALV AACLGTAQAR AQEGPQLDLQ RVDLAAGMHR
IDAQLAVTPQ ERETGLMHRK DMPSNEGMLF VFSVPAVQCF WMKNTLLPLT AAFVADDGTI
VNLADMKPQT LNSHCSEKPV RFVLEMNQGW FAKRGIKPGF KLSGAPFARP SPAR
|
|---|
| |