Gene Aave_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2552 
Symbol 
ID4667746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2801442 
End bp2802344 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID639823756 
ProductBeta-lactamase 
Protein accessionYP_970899 
Protein GI120611221 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0802917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGG CGGTGTGTGG GGCAGCAGCT CCGTGGATAC CCGATGCATG GGCCGGGGGC 
AAGAAATCCA TGGGCTCCGG TGCGGGAGCG TTCGCCCGCG CGGTGCAGGA AGTCGAAGCG
TCGGTGGGAG GGCGCCTGGG TGTGGCGCTG CTCGACATGG CCACCGGGCG CCAGGACGCG
CACCGGGGCG ACGAGCGGTT TCCCCTGTGC AGCACCTTCA AACTGCTGCT CGCGGCGCAC
GTGCTGCGGC GCGTGGACCA GGGGCATGAA CGGCTGGACC GCCGCATCAG CTACCGCAAA
TCCGACCTGG TGGAATATTC GCCTGCGACG GAGCGCCATG CGGACGGCGA TGGTATGACC
GTGGAGCAAC TGTGCGAGGC GGCCGTCACG CTCAGCGACA ACACGGCCGC CAACCTGCTG
CTGGGCACGC AGGGCGGGCC GCTCGAACTC ACGGCCTGGC TGCGGTCGCT GGGCGACACA
CAGACCCGGC TGGACCGCAT GGAGCCGGCG CTCAACGACG TACCGCCCGG GGAGGTGCGC
GACACCACCA CGCCCCGTGC CATGGCCCGT ACCGTGTGGG CCGTCACCCA GGGAGAGGCG
CTTTCCGCCG CAGCGCGCGC GCGGATGCTC GCCTGGCTCG TGGGCAATCG CACGGGCGAC
CGGCGCCTGC GGGCCGGCAT GCCGGAGGGC TGGCGCATCG GCGAAAAAAC GGGCACCGGT
CCGCGCGGGA CCAGCAACGA CGCCGGCCTG TTCTGGCCGC CGGACCGCGG AGCGGTGATG
GTGAGCTGCT ACCTGACGGG AAGCCCGGCG CCCGCGGAGC AGCGCGATGC CGCGATCGCC
CGGGTCGGCA CGCTGGCTGC ACGCTGGGCC CTGGAGGGCG CAGCCCCCGC TGTCAGGGGC
TGA
 
Protein sequence
MVAAVCGAAA PWIPDAWAGG KKSMGSGAGA FARAVQEVEA SVGGRLGVAL LDMATGRQDA 
HRGDERFPLC STFKLLLAAH VLRRVDQGHE RLDRRISYRK SDLVEYSPAT ERHADGDGMT
VEQLCEAAVT LSDNTAANLL LGTQGGPLEL TAWLRSLGDT QTRLDRMEPA LNDVPPGEVR
DTTTPRAMAR TVWAVTQGEA LSAAARARML AWLVGNRTGD RRLRAGMPEG WRIGEKTGTG
PRGTSNDAGL FWPPDRGAVM VSCYLTGSPA PAEQRDAAIA RVGTLAARWA LEGAAPAVRG