| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2545 |
|---|
| Symbol | |
|---|
| ID | 4666002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2794118 |
|---|
| End bp | 2795131 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639823749 |
|---|
| Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
|---|
| Protein accession | YP_970892 |
|---|
| Protein GI | 120611214 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.437885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0124572 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCC GGACGAAACT CAAGACCTTC CTGGCCGCCC TGGCCCTCGC CGCCACGGCG
GGCGTGGCGT CCGCGCAGAC GACCACGCTG CTCAACGTTT CCTATGACGT CGCCCGGGAG
TTCTACAAGG ACTACAACCA GGCCTTCGTC GCCCACTACA AGAAGACCAC CGGCAAGGAC
GTGCGCATCG ACCAGGCCCA CGGCGGCTCC AGCGCCCAGG CCCGCGCGGT GAACGACGGC
CTCGCCGCCG ACGTGGTCAC CTTCAACACC ACCACCGACA TCGACTTCCT GGCCGCCAAC
GGCGTGGTGG CCAAGGACTG GGCGAAGAAA TTCCCCAACG ACGCGTCGCC TACGACGTCC
ACCATGCTGT TCCTGGTGCG CAAGGGCAAC CCGAAGAACA TCAAGGACTG GGACGACCTG
GTCAAGCCCG GCGTGCAGGT GGTCGTGGTG AACCCCAAGA CGGGCGGCAA CGGCCGCTAT
GCCTACCTAG CCGCCTGGGG CGCCGTGCGC GAGAAGGGTG GCACCGATGC GCAGGCGGCA
GAGTTCGTGG GCAAGCTCTA CAAGAACGTG CCGGTGCTGG GCAAGGGCGG TCGCGACGCG
ACCAGCATCT TCCTGCAGCG CAACACGGGC GACGTGCTCA TCACGTTCGA ATCCGAGGTG
CTGTCCATCG AGCGCGAATT CGGCAAGGGC AAGGTCGATG CCGTCTATCC CTCGGTGAGC
GTGGTGGCCG AGAACCCCGT CGCCGTGGTG GAGCGCACCG TGACCAGGAA GGGCACGGGC
GACCTCGCCA AGGCCTACCT GGACTACCTG TATTCCGACG AAGGCCAGGA AATTGCCGCC
CAGCACGCGC TGCGCCCGCG CTCCGAAGCC GTGCTGAAGA AGCACGCCGA CGTCTTCAAG
CCGGTCAAGC AGTTCACCGT CGCCAAGTAT TTCGGATCGC TCGGCGAGGC GCAGAAGGTG
CACTTCAACG ACGGCGGCCA GTTCGACAAG CTCTACACCC CCGGCGGTCG CTGA
|
|---|
| Protein sequence | MNSRTKLKTF LAALALAATA GVASAQTTTL LNVSYDVARE FYKDYNQAFV AHYKKTTGKD
VRIDQAHGGS SAQARAVNDG LAADVVTFNT TTDIDFLAAN GVVAKDWAKK FPNDASPTTS
TMLFLVRKGN PKNIKDWDDL VKPGVQVVVV NPKTGGNGRY AYLAAWGAVR EKGGTDAQAA
EFVGKLYKNV PVLGKGGRDA TSIFLQRNTG DVLITFESEV LSIEREFGKG KVDAVYPSVS
VVAENPVAVV ERTVTRKGTG DLAKAYLDYL YSDEGQEIAA QHALRPRSEA VLKKHADVFK
PVKQFTVAKY FGSLGEAQKV HFNDGGQFDK LYTPGGR
|
|---|
| |