Gene Aave_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2534 
Symbol 
ID4667150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2781640 
End bp2782893 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content75% 
IMG OID639823738 
Productmajor facilitator superfamily transporter 
Protein accessionYP_970881 
Protein GI120611203 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.520582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.569267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA TTCATCCCGC GCATAACTCT GCCGGCATGG CCCCTGCAGC CCCCGGCGGC 
ACCGCGCAAC TCGCCGAGGT ACCGGCGGCA TTGGTCCTGC TGCTGGCCAC CACCGCCGGC
GTGAGCGTGG CCTCGCTCTA CTACAGCCAG CCGATGCTCG GCGTGCTGGG CCCGGACATC
CATGCGGACG GGCGCTCCGT CGGCCTCGTG CCCACCCTCA CGCAACTGGG CTATGCGCTC
GGTATCCTGT TGCTCGCCCC GCTGGGAGAC CGGTACGACC GGCGCCGCAT CATCCTGGCC
AAGGCGGCCA TGCTCGCCGC GGCGCTGCTG GCCAGCGCCG CGGCCCCCGG CATCGCCGCG
CTGCTGGCCG CCAGCCTCGC CATCGGCCTG TCCGCCACCC TCGCGCAGGA CGTAGTGCCG
GCCGCAGCCA CCGTGGCGGC CCCGCATGCG CGCGGCAAGG TGGTGGGCAC GGTGATGACG
GGCCTGCTGC TGGGCATCCT GCTGTCGCGG GTGGTGAGCG GCCTGGGCGC GGCGGCGTTC
GGCTGGCGCG CCGTGTATGG CGCCGCGGCC GCCGCGGTCG CGCTGCTGGG CGTGGCCGCC
TGGCGCTGGC TGCCGCGCTT CGCGCCCACC ACCCACCTGG GCTATGGCGC GCTGCTCGCC
TCCATGGCCG GGCTGTGGCG GTCGCAGCGC CCGCTGCGCC GCGCGGCACT CGCGCAGGGG
TTGCTGTCGG TCGCGTTCAG CGCTTTCTGG TCCACGCTTG CCGTGATGCT GCACAGCGAG
TTTCACTGGG GCAGTGCGGC GGCGGGTGCC TTCGGCCTTG CCGGAGCGGC CGGCGCGCTC
GCCGCGCCCC TGGCCGGCCG GCTGGCCGAC CGCCGCGGGC CCGGCTTGGT CACGCAACTG
GGATCGGGGC TGGCCCTGGT GTTGTTCGCG TCTCTGCTGG CCGCGCACTG GCTCCCCGGC
TGGGCGCAGC TCGGCCTGCT GGTGGCCAGT GCCATCGGTT TCGACTTCGG CATCCAGGCG
GCGCTGGTGG CCCACCAGAC CCTCGTCTAT GGCCTGGAGC CCGCCGCGCG CAGCCGCCTG
AATGCCCTGC TGTTCACTGG CGTGTTCATC GGCATGGCCA CGGGTTCCGC GCTCGGTGCG
CTGGCCATGG CCCGCTGGGG CTGGTCCGGC GTGGCCGTGC TGGCCACGCT GGCCTGTGCG
GCAGCGCTGG CCGTGCGCAT GGGCGATGCG CACGGTCGGG CCGCCCGGGC CTGA
 
Protein sequence
MTSIHPAHNS AGMAPAAPGG TAQLAEVPAA LVLLLATTAG VSVASLYYSQ PMLGVLGPDI 
HADGRSVGLV PTLTQLGYAL GILLLAPLGD RYDRRRIILA KAAMLAAALL ASAAAPGIAA
LLAASLAIGL SATLAQDVVP AAATVAAPHA RGKVVGTVMT GLLLGILLSR VVSGLGAAAF
GWRAVYGAAA AAVALLGVAA WRWLPRFAPT THLGYGALLA SMAGLWRSQR PLRRAALAQG
LLSVAFSAFW STLAVMLHSE FHWGSAAAGA FGLAGAAGAL AAPLAGRLAD RRGPGLVTQL
GSGLALVLFA SLLAAHWLPG WAQLGLLVAS AIGFDFGIQA ALVAHQTLVY GLEPAARSRL
NALLFTGVFI GMATGSALGA LAMARWGWSG VAVLATLACA AALAVRMGDA HGRAARA