Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2534 |
Symbol | |
ID | 4667150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2781640 |
End bp | 2782893 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639823738 |
Product | major facilitator superfamily transporter |
Protein accession | YP_970881 |
Protein GI | 120611203 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.520582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.569267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA TTCATCCCGC GCATAACTCT GCCGGCATGG CCCCTGCAGC CCCCGGCGGC ACCGCGCAAC TCGCCGAGGT ACCGGCGGCA TTGGTCCTGC TGCTGGCCAC CACCGCCGGC GTGAGCGTGG CCTCGCTCTA CTACAGCCAG CCGATGCTCG GCGTGCTGGG CCCGGACATC CATGCGGACG GGCGCTCCGT CGGCCTCGTG CCCACCCTCA CGCAACTGGG CTATGCGCTC GGTATCCTGT TGCTCGCCCC GCTGGGAGAC CGGTACGACC GGCGCCGCAT CATCCTGGCC AAGGCGGCCA TGCTCGCCGC GGCGCTGCTG GCCAGCGCCG CGGCCCCCGG CATCGCCGCG CTGCTGGCCG CCAGCCTCGC CATCGGCCTG TCCGCCACCC TCGCGCAGGA CGTAGTGCCG GCCGCAGCCA CCGTGGCGGC CCCGCATGCG CGCGGCAAGG TGGTGGGCAC GGTGATGACG GGCCTGCTGC TGGGCATCCT GCTGTCGCGG GTGGTGAGCG GCCTGGGCGC GGCGGCGTTC GGCTGGCGCG CCGTGTATGG CGCCGCGGCC GCCGCGGTCG CGCTGCTGGG CGTGGCCGCC TGGCGCTGGC TGCCGCGCTT CGCGCCCACC ACCCACCTGG GCTATGGCGC GCTGCTCGCC TCCATGGCCG GGCTGTGGCG GTCGCAGCGC CCGCTGCGCC GCGCGGCACT CGCGCAGGGG TTGCTGTCGG TCGCGTTCAG CGCTTTCTGG TCCACGCTTG CCGTGATGCT GCACAGCGAG TTTCACTGGG GCAGTGCGGC GGCGGGTGCC TTCGGCCTTG CCGGAGCGGC CGGCGCGCTC GCCGCGCCCC TGGCCGGCCG GCTGGCCGAC CGCCGCGGGC CCGGCTTGGT CACGCAACTG GGATCGGGGC TGGCCCTGGT GTTGTTCGCG TCTCTGCTGG CCGCGCACTG GCTCCCCGGC TGGGCGCAGC TCGGCCTGCT GGTGGCCAGT GCCATCGGTT TCGACTTCGG CATCCAGGCG GCGCTGGTGG CCCACCAGAC CCTCGTCTAT GGCCTGGAGC CCGCCGCGCG CAGCCGCCTG AATGCCCTGC TGTTCACTGG CGTGTTCATC GGCATGGCCA CGGGTTCCGC GCTCGGTGCG CTGGCCATGG CCCGCTGGGG CTGGTCCGGC GTGGCCGTGC TGGCCACGCT GGCCTGTGCG GCAGCGCTGG CCGTGCGCAT GGGCGATGCG CACGGTCGGG CCGCCCGGGC CTGA
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Protein sequence | MTSIHPAHNS AGMAPAAPGG TAQLAEVPAA LVLLLATTAG VSVASLYYSQ PMLGVLGPDI HADGRSVGLV PTLTQLGYAL GILLLAPLGD RYDRRRIILA KAAMLAAALL ASAAAPGIAA LLAASLAIGL SATLAQDVVP AAATVAAPHA RGKVVGTVMT GLLLGILLSR VVSGLGAAAF GWRAVYGAAA AAVALLGVAA WRWLPRFAPT THLGYGALLA SMAGLWRSQR PLRRAALAQG LLSVAFSAFW STLAVMLHSE FHWGSAAAGA FGLAGAAGAL AAPLAGRLAD RRGPGLVTQL GSGLALVLFA SLLAAHWLPG WAQLGLLVAS AIGFDFGIQA ALVAHQTLVY GLEPAARSRL NALLFTGVFI GMATGSALGA LAMARWGWSG VAVLATLACA AALAVRMGDA HGRAARA
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