Gene Aave_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2529 
Symbol 
ID4667222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2776539 
End bp2777996 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content75% 
IMG OID639823733 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_970876 
Protein GI120611198 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.918806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCG TTGCGATGAT GCCTCTCCTG GCGCTGCTGT CCGCCTGCAC GCTGACCCCT 
CCGCTGGAAC GGCCGGCTCC TCCGGTGCCC GCGGTGTTCC CGGACTACGG CGGCCGTGCT
GGCGCCGCTG CCTCGCTCTC GCCAGGCACT TCCGTGCGTC CGGACGTGCC CGTGGCCGAC
CTGGGCTGGC GCGACATGTT CGAAGATCCG CGCCTGCAGC GGCTGATCGC GGCCGCGCTG
GAGCACAACC GCGACCTGCG GCTGGCGGCG CTGCAGGCCG AAGCCGTGCA GGCCCAGTAC
CGCATCCAGC GCTCCGCGCG CTGGCCCGAG GTGGCGCTGG ACGCCTCCGC GTCGCGCGAG
CGCGGGGCCC GCTCCGGCAC CGGAGCCGGT GCGGCCGGGT CCGCTGGCGC GGCGGTTTCC
GGGCAGGCGG CCTTGGGCGT GGGCGTGAGC GCGTTCGAAC TGGACCTGTT CGGCCGCGTC
CGGTCGCTGT CCGATGCCGC GCTGGCGCGT TACCTGGCCA GCGAGCACGG CCACCGCGCC
GCACAGATCA CCCTGGTGGG CGCGGTGGCG GACGCGTATT TCGCCCAGCG GCTGGCGCAG
GAACAGCTGC AGCTCACCGT GCGCACGCTT TCGGATTGGC GGCAATCCCT GGAACTGGCG
CGGCTATGGC GGCAGGCCGG GCAGAACAGC GGGCTGGACG TGGTGCAGGC CGAAGGGCAG
GTCGCCGCCG CGGAGGCCGA CCTGGAGGCT CGCCAGCGGG CGCTCGACCA GGCGGACAAC
GCCCTGCGGC TGCTGCTGGG CTCCGATCCG CCGGCAGTCC TGCCCGAGCC GCTGCCGCTG
GAGGCGCGGC CCGTCGCCGC CCGTCTGCCG GCGGGGCTGC CCTCCGGCCT GCTGCTGGCG
CGGCCGGACC TGCTGCAGGC CGAACAGGCG CTCGTCGCCG CGCATGCCGA TGTCGGCGCG
GCGCGGGCGG CGTTCTTTCC GCGGATCGCG CTCACCGCGT CCGTCGGCCG TGCCAGCGAT
TCGCTGGGCG GCCTGTTCGA CGCGGGCTGG GGCACCTGGC GCTTCGCGCC GCAGATCACC
CAGCCGCTCT TCGACCGCGG TCGCCTGCGC GGGGAACTGC GCCTCGCCCA AGTGCGGCGC
TCCGAGGCTG TGGTCCAGTA CGAACGGGCG ATCCAGGTCG CCTTCCGCGA GGTGGCCGAT
GCGCTCGCGG GAGCGGCCAC CTACGGCCGG CAGATCGACG CCCAGGCGCG TACCGTGGCC
AGCGCCGCCC GGCGCGTGGA GCTGTCGGAA CTGCGCTACC GGGCGGGCAC GGACGGGCGA
CTGGAACTGC TGGACGCCCG GCGCCAGCAG TACGCCGCGC AGCAGGCGCT GCTGGACCTG
CGCCGCGCGG AGCTCGGCAA TGCGGTGGCG CTCTACAAGG CGCTGGGTGG CGGGCTGGTC
GAGCGGGCCC ATCGTTGA
 
Protein sequence
MRTVAMMPLL ALLSACTLTP PLERPAPPVP AVFPDYGGRA GAAASLSPGT SVRPDVPVAD 
LGWRDMFEDP RLQRLIAAAL EHNRDLRLAA LQAEAVQAQY RIQRSARWPE VALDASASRE
RGARSGTGAG AAGSAGAAVS GQAALGVGVS AFELDLFGRV RSLSDAALAR YLASEHGHRA
AQITLVGAVA DAYFAQRLAQ EQLQLTVRTL SDWRQSLELA RLWRQAGQNS GLDVVQAEGQ
VAAAEADLEA RQRALDQADN ALRLLLGSDP PAVLPEPLPL EARPVAARLP AGLPSGLLLA
RPDLLQAEQA LVAAHADVGA ARAAFFPRIA LTASVGRASD SLGGLFDAGW GTWRFAPQIT
QPLFDRGRLR GELRLAQVRR SEAVVQYERA IQVAFREVAD ALAGAATYGR QIDAQARTVA
SAARRVELSE LRYRAGTDGR LELLDARRQQ YAAQQALLDL RRAELGNAVA LYKALGGGLV
ERAHR