Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2529 |
Symbol | |
ID | 4667222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2776539 |
End bp | 2777996 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639823733 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_970876 |
Protein GI | 120611198 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.918806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCG TTGCGATGAT GCCTCTCCTG GCGCTGCTGT CCGCCTGCAC GCTGACCCCT CCGCTGGAAC GGCCGGCTCC TCCGGTGCCC GCGGTGTTCC CGGACTACGG CGGCCGTGCT GGCGCCGCTG CCTCGCTCTC GCCAGGCACT TCCGTGCGTC CGGACGTGCC CGTGGCCGAC CTGGGCTGGC GCGACATGTT CGAAGATCCG CGCCTGCAGC GGCTGATCGC GGCCGCGCTG GAGCACAACC GCGACCTGCG GCTGGCGGCG CTGCAGGCCG AAGCCGTGCA GGCCCAGTAC CGCATCCAGC GCTCCGCGCG CTGGCCCGAG GTGGCGCTGG ACGCCTCCGC GTCGCGCGAG CGCGGGGCCC GCTCCGGCAC CGGAGCCGGT GCGGCCGGGT CCGCTGGCGC GGCGGTTTCC GGGCAGGCGG CCTTGGGCGT GGGCGTGAGC GCGTTCGAAC TGGACCTGTT CGGCCGCGTC CGGTCGCTGT CCGATGCCGC GCTGGCGCGT TACCTGGCCA GCGAGCACGG CCACCGCGCC GCACAGATCA CCCTGGTGGG CGCGGTGGCG GACGCGTATT TCGCCCAGCG GCTGGCGCAG GAACAGCTGC AGCTCACCGT GCGCACGCTT TCGGATTGGC GGCAATCCCT GGAACTGGCG CGGCTATGGC GGCAGGCCGG GCAGAACAGC GGGCTGGACG TGGTGCAGGC CGAAGGGCAG GTCGCCGCCG CGGAGGCCGA CCTGGAGGCT CGCCAGCGGG CGCTCGACCA GGCGGACAAC GCCCTGCGGC TGCTGCTGGG CTCCGATCCG CCGGCAGTCC TGCCCGAGCC GCTGCCGCTG GAGGCGCGGC CCGTCGCCGC CCGTCTGCCG GCGGGGCTGC CCTCCGGCCT GCTGCTGGCG CGGCCGGACC TGCTGCAGGC CGAACAGGCG CTCGTCGCCG CGCATGCCGA TGTCGGCGCG GCGCGGGCGG CGTTCTTTCC GCGGATCGCG CTCACCGCGT CCGTCGGCCG TGCCAGCGAT TCGCTGGGCG GCCTGTTCGA CGCGGGCTGG GGCACCTGGC GCTTCGCGCC GCAGATCACC CAGCCGCTCT TCGACCGCGG TCGCCTGCGC GGGGAACTGC GCCTCGCCCA AGTGCGGCGC TCCGAGGCTG TGGTCCAGTA CGAACGGGCG ATCCAGGTCG CCTTCCGCGA GGTGGCCGAT GCGCTCGCGG GAGCGGCCAC CTACGGCCGG CAGATCGACG CCCAGGCGCG TACCGTGGCC AGCGCCGCCC GGCGCGTGGA GCTGTCGGAA CTGCGCTACC GGGCGGGCAC GGACGGGCGA CTGGAACTGC TGGACGCCCG GCGCCAGCAG TACGCCGCGC AGCAGGCGCT GCTGGACCTG CGCCGCGCGG AGCTCGGCAA TGCGGTGGCG CTCTACAAGG CGCTGGGTGG CGGGCTGGTC GAGCGGGCCC ATCGTTGA
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Protein sequence | MRTVAMMPLL ALLSACTLTP PLERPAPPVP AVFPDYGGRA GAAASLSPGT SVRPDVPVAD LGWRDMFEDP RLQRLIAAAL EHNRDLRLAA LQAEAVQAQY RIQRSARWPE VALDASASRE RGARSGTGAG AAGSAGAAVS GQAALGVGVS AFELDLFGRV RSLSDAALAR YLASEHGHRA AQITLVGAVA DAYFAQRLAQ EQLQLTVRTL SDWRQSLELA RLWRQAGQNS GLDVVQAEGQ VAAAEADLEA RQRALDQADN ALRLLLGSDP PAVLPEPLPL EARPVAARLP AGLPSGLLLA RPDLLQAEQA LVAAHADVGA ARAAFFPRIA LTASVGRASD SLGGLFDAGW GTWRFAPQIT QPLFDRGRLR GELRLAQVRR SEAVVQYERA IQVAFREVAD ALAGAATYGR QIDAQARTVA SAARRVELSE LRYRAGTDGR LELLDARRQQ YAAQQALLDL RRAELGNAVA LYKALGGGLV ERAHR
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