| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2528 |
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| Symbol | |
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| ID | 4668180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2773365 |
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| End bp | 2776535 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823732 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_970875 |
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| Protein GI | 120611197 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.3946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.940253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGT TCTTCATTCG CCGCCCGGTG TTCGCCTGGG TGATCGCCCT GTTCATCGTG
CTGTTCGGCG CGATCGCCAT TCCGCAGTTG CCGATCGCGC GCTACCCGGC GGTGGCGCCG
CCGGCCGTGA GCCTGTTCGC GTCCTATCCG GGCGCCACGC CCCAGACCCT GAACGACTCC
GTGGTCAGCC TGATCGAGCG CGAACTCTCG GGTGTCAAGA ACCTGCTGTA CTTCGAGTCA
TCGGTCGATA CCTCCGGGTC GGCGCAGATC ACCGCCACCT TCAAGCCCGG CACCAACCCG
GAACTGGCGC AGGTGGACGT GCAGAACCGC ATCAAGGCCG TGGAGCCGCG CCTGCCGCAG
GCCGTGCGCC AGAGCGGCCT GCAGGTGGAA TCCGCCGCGT CCGGCTTCCT GATGCTGATC
GGCATGACCT CGCGCGACGG CCGCTACGAC GAGGTGGGGC TCAACGATTA CATGGCCCGC
AACATCGTGC AGGAGCTGCG CCGCATCGAC GGCGTGGGGC GCGTGCAATT GTTCGGTGCC
GAGCAGGCGA TGCGGGTCTG GGTGGACCCG GCCCGGCTGC TGTCCTACGG CCTGGCGATG
GGCGACGTCA CCCAGGCGAT CGAGCAGCAG AATGCGCAGG TCGCCCCCGG GCGCGTGGGC
GATGCGCCGA CGCTGCCGGG CCAGCGCGTG ACCGTGCCGC TCACGGTGCA GGGGCAGCTG
TCCACGCCGG AGCAGTTCGC GGCGATCGTG CTCAAGGCCG GCGCCGACGG CTCGAAGGTG
GTGCTGCGCG ACGTGGCCCG GGTGGAGCTG GGGGCGCAGT CGTACGCCTT CGCCAACCGC
GAGAACGGGC GGGTTGCCAC CAGTGCTGCC ATCCAGCTCT CGCCCGGGGC GAACGCGGTG
CGCACCGCGC AGGCCGTGCA GGACCGGCTG GCCGAACTGG CGCGCACCAT GCCCGCGGGC
ATGGAGGTTT CGGTGCCGTT CAATACCGCG CCCTTCGTGA AGATCTCCAT CGAGAAGGTG
CTCCACACGC TGGCGGAGGC CATGGTGCTG GTGTTCGCGG TGATGTTCCT GTTCCTGCAG
AACATCCGCT ACACGCTGAT TCCGGCCATC GTCGCGCCCA TCGCGCTGCT GGGCACGTTC
ACCGTGATGC TGGTGGCCGG TTTCTCGATC AACGTGCTGA CCATGTTCGG CATGGTGCTG
GCCATCGGCA TCATCGTCGA TGACGCCATC GTGGTGGTGG AGAACGTCGA GCGGCTGATG
GCCGCGGAAG GCCTGTCGCC CCGGGATGCG ACGGTCCGGG CCATGCGGGA GATCACCGGG
GCGGTGGTCG GCATCACCCT GGTGCTCACG GCCGTGTTCA TTCCCATGGC TTTCGCCACC
GGCTCGGTGG GCGTCATCTA CCGGCAGTTC ACGCTGTCGA TGGCCGTGTC CATCCTGTTC
TCGGCCTTCC TGGCCCTCAC GCTCACGCCC GCGCTCTGCG CGACGCTGCT GCGGCCGGTC
GATCCCGGCC ACCACGAGCG GCGCGGCTTC TTCGGTGCCT TCAACCGCGG CTTCGACCGC
CTGTCGCGGG GCTACGCGGC CCGCGTGGCG CGCCTGGCGG GGCGCAGCGG CCGCATGATG
GTCGCCTTCG CTCTGGTCTG CGCGGTGCTC GTGCTGGCGG CGCGCCAGCT GCCTTCGTCG
TTCCTTCCCG AAGAGGACCA GGGCTATTTC ATGACCTCCA TCCAGTTGCC CACGGGCGCC
ACCAGCGAGC GCACGCTGGA TGTGGTCAAG GCCTTCGAGT CGCACGTCGC CTCCCGCCCG
GGCCTGGCGT CCAACATGGT GATCCAGGGG TTCAGCTTCT CGGGTTCGGG GCCGAATGCC
GCGATGGCGT TCACCATGCT CAAGGACTGG AACCAGCGCG ACGGCGCCAG TGCGCGCGAT
GAGTCGGAGC GGGCGCAGGA CGCGATGCGC CACACGCCGG AAGGCACGGT GATGAGCCTG
CTGCCGCCCG CCATCGACGA GCTGGGAACT TCGTCGGGCT TCACGATGTT CCTGCAGGAC
CGCGCCGGCC GCGGGGCGGA GGCCCTGGCG GCCGCGCAGG CCCGGCTCAT GGGACTGGCC
GCGCAGAGCC CGCTGCTGCG CAACGTCTAT CCCGACGGCC TGCCGCCGGG TGGGAGCGTG
CGCCTGGACA TCGACCGCCG CAAGGCCGAG GCCATGGGCC TGTCGTTCAA TGCGATCAGC
ACCACGCTCT CGGCCGCGAT GGGCTCGGCC TACGTCAACG ATTTCCCGAA CGCCGGGCGC
ATGCAGCAGG TCATCGTGCA GGCCGACGCC CCCGCGCGCA TGCAGCTGGG CGATGTGCTG
AAGCTGCGCG TGCGCAATGC CGCGGGCGGC CTCGTGCCGC TGGGCGAGGT GGCCACCCCG
GTCTGGACCG AATCGCCCCA GCAGATGATG CGCTTCCAGG GCTTCCCCGC CGCGCGCATC
GCCGGCGGCG CGGCGCCCGG CGTTTCCAGC GGCGCGGCCA TGGCCGAGAT GGAGCGGCTG
GTGGCGCAAC TGCCCCTGGG CTTCGCCGCG GCATGGACGG GCCAGTCGCT GCAGGAGCGC
CAGTCGGCCG CGCAGGCGCC GCTGCTCATG GCGCTGTCGG CCCTGGTGGT CTTCCTGGTG
CTGGCGGCGC TCTATGAGAG CTGGTCCATT CCGCTGGCGG TGATGCTGGT GGTGCCGCTC
GGCCTGGTCG GGGCGGTGGC GGCGGTCATG CTGCGCGGCC TGCCCAACGA CGTGTTCTTC
AAGGTCGGCA TGATCACCAT CATCGGCCTC TCGGCCAAGA ACGCGATCCT GATCGTGGAG
TTCGCCCGGC AACTGCATTC AGAAGGTCGC GGCCTGCTCG ATGCGGCGGT GACCGCGGCG
CGCCTGCGGC TGCGGCCGAT CCTGATGACC TCGCTGGCCT TCGCGCTGGG CGTGGTGCCG
CTGATGCTCG CCTCGGGCGC CAGTGCCGAG ACGCAGCATG CCATCGGCAC CGGCGTGTTC
GGCGGCATGG TGAGCGGCAC GGTGCTGGCG GTGTTCTTCG TGCCGGCGTT CTTCGTCTTC
GTGATGGGGC TGCAGGAGCG GGTGGTCGCA TGGCGGGCCC GCCGCCGCCC GCCAGAGGCG
CTTCCGGCAC CGGCCGGCGC ACCCGCTGTA CCCACCACGG GAGGGCAGTG A
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| Protein sequence | MPQFFIRRPV FAWVIALFIV LFGAIAIPQL PIARYPAVAP PAVSLFASYP GATPQTLNDS
VVSLIERELS GVKNLLYFES SVDTSGSAQI TATFKPGTNP ELAQVDVQNR IKAVEPRLPQ
AVRQSGLQVE SAASGFLMLI GMTSRDGRYD EVGLNDYMAR NIVQELRRID GVGRVQLFGA
EQAMRVWVDP ARLLSYGLAM GDVTQAIEQQ NAQVAPGRVG DAPTLPGQRV TVPLTVQGQL
STPEQFAAIV LKAGADGSKV VLRDVARVEL GAQSYAFANR ENGRVATSAA IQLSPGANAV
RTAQAVQDRL AELARTMPAG MEVSVPFNTA PFVKISIEKV LHTLAEAMVL VFAVMFLFLQ
NIRYTLIPAI VAPIALLGTF TVMLVAGFSI NVLTMFGMVL AIGIIVDDAI VVVENVERLM
AAEGLSPRDA TVRAMREITG AVVGITLVLT AVFIPMAFAT GSVGVIYRQF TLSMAVSILF
SAFLALTLTP ALCATLLRPV DPGHHERRGF FGAFNRGFDR LSRGYAARVA RLAGRSGRMM
VAFALVCAVL VLAARQLPSS FLPEEDQGYF MTSIQLPTGA TSERTLDVVK AFESHVASRP
GLASNMVIQG FSFSGSGPNA AMAFTMLKDW NQRDGASARD ESERAQDAMR HTPEGTVMSL
LPPAIDELGT SSGFTMFLQD RAGRGAEALA AAQARLMGLA AQSPLLRNVY PDGLPPGGSV
RLDIDRRKAE AMGLSFNAIS TTLSAAMGSA YVNDFPNAGR MQQVIVQADA PARMQLGDVL
KLRVRNAAGG LVPLGEVATP VWTESPQQMM RFQGFPAARI AGGAAPGVSS GAAMAEMERL
VAQLPLGFAA AWTGQSLQER QSAAQAPLLM ALSALVVFLV LAALYESWSI PLAVMLVVPL
GLVGAVAAVM LRGLPNDVFF KVGMITIIGL SAKNAILIVE FARQLHSEGR GLLDAAVTAA
RLRLRPILMT SLAFALGVVP LMLASGASAE TQHAIGTGVF GGMVSGTVLA VFFVPAFFVF
VMGLQERVVA WRARRRPPEA LPAPAGAPAV PTTGGQ
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