| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2504 |
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| Symbol | |
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| ID | 4665975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2740441 |
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| End bp | 2741751 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823707 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_970851 |
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| Protein GI | 120611173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.10477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0160345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCATA CCAGACCATT CATCGCAACG GCCTGCGCTG TCCTGTTGGC CGGCGTGCCC
GTTGTCCCTG CGCTTGTCCA TGCGCAATCC CTGAGCGCCC CTTCCGGGGC CGCGTTCCAT
GAGCCGACGG CCGCGACCCT GACTTTGGCG GAAGCCATTG CGCTGGCGCT CGCCAGGCAC
CCCGCCGTCG CCGTGGCGCA GCGGGAGTTC GACGCGACGC GCGGCGCCGT CCTGCAGGCC
GGCCCGCGCC CGAACCCCGA GCTGTCCGTG CAGCAGGAGG ATTTCAAGCA GGGGCGACGA
ACGTCCACCG TCCAGATCAC GCAATCGCTG GAGCTCGGCG GCAAGCGGGC CAGCCGGACA
GCTGTCGCCG AGCGGATCAG CGCGCAAGCG GCTGCCGACA TCGAGCAGGC CCGTGCGGAC
GTGCGTTCCC AGGCCGTCGT CGCCTTTCAT GAAGTGCTGG TCGGCCAGGA ACGCCTGCGG
CTGGCCCAAT CCTCGCTGCA ACTGGCCAGC GGCGATGCGG AAGCGACCGG CAAACGGGTG
CAGGCGGGCA AGATCGCCCC GCTGGAGGAG ACGCGGGCCA AGGTAGCGCG TGCCGCGGCG
GCCGCAGAAT TGGCGCAGGC GGAAGGCGCC CTGCGGGCCA GCCGCCAGAG ACTGTTCTCC
TTATGGGGCG ACATGGGCCG CAGCGGGACG GCGTTGATCG GCCACCTGGA CCTGCCGGCC
GAAGGCCTGG CCGACGAGGC GGTGTTCGCG CGGATGGCCG CATCGCCCGC ACTGCAGCGC
GCCCGGCTCG AGCTGGAGCG GGCGCAGGCC GCCGTGGCGC TCGAACGCTC GCGCCAGGTC
GTGGATGTCG CGGTGTCCGT CGGTGTCAAG CGCAGCCAGG AGAACGGGGT GACGGCTGCC
GTCGTGGGCC TGACCGTGCC CCTGCCGGTG TTCGACCGGA ACCAGGGCAA CCTCGCCGAA
GCGCTGGCAC GCGAGGAAAA GGCCCGCGAA GAGCTGAATG CGGTCGAGCT GAAGCTCGCG
TCCGATATCG CCCAGGCCCG GGAGCAGTTG CGGTCTGCCC GTGCCGAGGC GCAGACATTG
CAGCAGGACG CGATTCCCGG TGCGCGCGAA GCCTACGAGG CCGCATCGCG GGGATTCCAG
CTGGGCAAGT TCAGCTACCT GGAAACGCTG GATGCCCAGC GCACCCTGGT CGGCGCCCAG
TCCCAGTTCC TTCGCGCGCT GCTCGATACC TACCGCGCCG CAGCCGAACT GGAGCGCCTG
CTCCACGTCA CGGACGCGTC TTCCACCCTC CTGAATCCTT CCAGGCCCTG A
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| Protein sequence | MSHTRPFIAT ACAVLLAGVP VVPALVHAQS LSAPSGAAFH EPTAATLTLA EAIALALARH
PAVAVAQREF DATRGAVLQA GPRPNPELSV QQEDFKQGRR TSTVQITQSL ELGGKRASRT
AVAERISAQA AADIEQARAD VRSQAVVAFH EVLVGQERLR LAQSSLQLAS GDAEATGKRV
QAGKIAPLEE TRAKVARAAA AAELAQAEGA LRASRQRLFS LWGDMGRSGT ALIGHLDLPA
EGLADEAVFA RMAASPALQR ARLELERAQA AVALERSRQV VDVAVSVGVK RSQENGVTAA
VVGLTVPLPV FDRNQGNLAE ALAREEKARE ELNAVELKLA SDIAQAREQL RSARAEAQTL
QQDAIPGARE AYEAASRGFQ LGKFSYLETL DAQRTLVGAQ SQFLRALLDT YRAAAELERL
LHVTDASSTL LNPSRP
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