| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2490 |
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| Symbol | |
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| ID | 4665598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2724977 |
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| End bp | 2727865 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639823695 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_970839 |
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| Protein GI | 120611161 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.297128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0871585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGCA CCGGTGCGCG CCGGTGCCCT GTTGCCCTGC GGGGGCTTGC CAGCGCAAGC
CGGCCGTGCC ACGCTGCTCT GCGCATGAGC CCCTTTCCAT TCCTCCGTCG TCCGGGCCAG
CCCTCCCCAG GCAGCCCGGC GCGGTTCTGG CACGTGCGCC TCGCGTTCGC GCCGCTGCTG
TCGGCGGCGC TGCTGGGAAT CACCTACCTG TACTGGCACC ATGCCGATCA GCTGCAGGAA
ACCCGGCGCC GCCAGAACTT CGACGCGGCG GCCGAGCGGG TGGTGTCGGC GCTGCGCGAC
CGCATGGGCG CCTATGAAAT GGTGCTGCGC GGCCTCAAGG GCTATGTGGA CGGCTCCACG
GCCATCGAGC AGCGCGAGTT CTCGGCCTAC GTCCATGCGC TGCAGATGGA CCAGACGCGC
CCGGGGCTGC AGGCCCTGTG CCTGATCGAG CAGATCCCGC ACGACAGCCT GAGGCTGCAT
GTCCAGGCGA TGCGGGCGCA GGGGCTGGAG CGCTACGAGG TGCGCTCGCG CGGGGACCGC
GGCGCCTATG CCGTCATCAC CCGGGTGGAA CCCCGCACCC GGGGCAACCT GACCGCATTG
GGCTTCGACG TCGCCGGCCT GCCCGCTGCC CGGGAGGCCC TGGATCGCGC GCGCGATTCC
GGCGCCCTGG CGCTGTCCGG TCTCTGGAGC GTCGGCGGCG ACGACGATCC CGGACTCATG
ATGTTCCTGC CCGTCTATGC CGGCGGGGGA ACGCCGGTCA CGCAGGAAGC GCGGCGCGCG
GCCATCCGGG GCTGGGTGGC GGCGCCGTTC CGCGTGGCGG CCGTGGCCGG CGCCCTGCTG
GGCGAACTGG ACCCGGGCGT GTCGCTGCGC ATCCAGGATG GCCTGGCTGG CGGCGGTGCC
GATGCGGACG TGGGAGAGCT CTACAACTCC CGCGACGCGG CGGAGCCAGC CCCGCACCTG
TCCGGCGAGC GGCTGCGGGC GGCGCGCGTG CTGATCGTGG GCGGCCGGCC CTGGACGCTC
ACCATGGAGC CCCTGCCGGC GTTCGACCAC CGCCTGGGCC GTGACAACTA CGCGCTCATC
GCCTGGCTGG GGGCGTTGTT CAGCGTGCTG GCGGGCTGGT TCATCGCCAT GCAGGCCACC
GGCCACCAGC GCGCACTGGC CCTGGCCCAG TCGATGACGA GCGAACTGCG CACCGCGCGC
GACAACCTGG AAGGCATCCT GCAGGCCGTT CCGGACCTGC TGGTCGAACT GGACGCCGGT
GGACGCATCC ATTACCACCG TTCGGCCCGG TCCGACCTGT CGGCCGAACC CAGCCAGGCA
TTCGAAGGCC GGATGCTGGC CGAGGTTCTG CCGCCGGGCG TGGCATCGGA GTTCATGCAG
GCACTGCGCG AAGCCGAATC CCAGGGGGTG TCGCTGGGCC GGCAGTACCA CCAGGACACT
GCCATGGGGC AGCGCTGGTT CGAACTGTCC GTGGCGCGCC GGCTCGGTGT GGACTCCGCC
GCAGGGCAGG GCGGCGGCGC ATCCCGCTAT GTGGCCCTGG CCCGGGACAT CACGGCGCGC
CGCGATGCCG AGGCGGCCAT GCACCGCATG GCGTACTACG ACGCGCTGAC CGGCCTGCCC
AACCGGCGCC TGCTGTTCGA GCAGTTGCAG GACGCGCTGG ACCAGGCCCG CAGTGGCGGG
CGCATCGGCG CCCTGTTCTT CATCGACCTG GACAATTTCA AGCAGCTCAA CGATGCCCGG
GGGCATGCGG CGGGCGACCG CCTGCTGGTG CAGGTCGCAC GGCGGCTGGA GCGCCTGCTG
CAGGGCTTCG GAAGCGTCGT GCGCATCGGG GGCGACGAGT TCGTGGTGCT TATCCCCCGC
ATCGCCAACG GCATGCAGGC CGGCGTGGAT GCCGCAGGGG CCATGGCAGC GCGGCTGCGC
GAGGGGATGG AAGCACCATA CGACCTGGGC AGCACCTACT ATTCCGTCAC CGCCAGCACG
GGGGTGACGC TGTTTCCCAA GGCCGGCGAA ACCGTGGAGG ATCTTCTGCG CGAAGCCGAC
ACCGCGATGT ACCGCGCGAA ATCGTCCGGC GCCCACCGCG TGCGATTCTT CGAGGCCGAC
ATGCAGGCGG CCGCGCAGGA GCGGCTGTCG CTGGAGCAGG ACCTTGCGCA GGCGATCGCC
GACGATGCGC TCGAGATCCA CATCCATCCC CAGGTGGACC GGGACGGGGC CGTGTGCGGC
GGCGAACTGC TGCTGCGCTG GAGGCATCCG GCCCACGGCA ATGTGTCGCC CGCCCGCTTT
GTCGCCATCG CGGAGGAGTC CGGCTTGATC CTGCGCCTGG GCGCGCGCGT GATCCGCCGC
GCCTGCGATG CCCTGGCGCA ATTGCACGCG GCGGGCCTGG ACATGACGAT TTCCGTCAAC
GTGAGCGCCC GACAGTTCCG GCAGGAGGAC TTCGTGGCCT ACGTGCGCGA CGCGTTGGCC
TACAGCGGCG CGCCGGCGTC CCGGCTCATC CTGGAAGTCA CCGAAACCCT GCTGGTGGAG
AACTGGCAGG ATACCGCGCG TCGCATGGCG GAACTGGTGC GGTTCGGGGT GCGCTTTTCC
ATCGACGACT TCGGGACGGG CTATTCGAGC CTGGCCTACC TGAAGCGGCT GCCGCTCTAT
GAACTCAAGA TCGACCGGAG CTTCGTGCAG GACGCGCCGG TGAACCCCAA CGATGCGGCC
ATCGTGCGCG CCATCCTGTC CATGGCGCAG CACCTGCGCC TGCGTGTGGT GGCCGAAGGG
GTGGAAACCG AGACCCAGGC GGAATTCCTG GCCCGGCACG GCTGCGACGC GATGCAGGGC
TATCTGTACG CCCACCCCCT GCCGCTCAAG GAGTGGATCG ACACGCAGGT GGGTGCAGCG
GCGGTCTGA
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| Protein sequence | MPCTGARRCP VALRGLASAS RPCHAALRMS PFPFLRRPGQ PSPGSPARFW HVRLAFAPLL
SAALLGITYL YWHHADQLQE TRRRQNFDAA AERVVSALRD RMGAYEMVLR GLKGYVDGST
AIEQREFSAY VHALQMDQTR PGLQALCLIE QIPHDSLRLH VQAMRAQGLE RYEVRSRGDR
GAYAVITRVE PRTRGNLTAL GFDVAGLPAA REALDRARDS GALALSGLWS VGGDDDPGLM
MFLPVYAGGG TPVTQEARRA AIRGWVAAPF RVAAVAGALL GELDPGVSLR IQDGLAGGGA
DADVGELYNS RDAAEPAPHL SGERLRAARV LIVGGRPWTL TMEPLPAFDH RLGRDNYALI
AWLGALFSVL AGWFIAMQAT GHQRALALAQ SMTSELRTAR DNLEGILQAV PDLLVELDAG
GRIHYHRSAR SDLSAEPSQA FEGRMLAEVL PPGVASEFMQ ALREAESQGV SLGRQYHQDT
AMGQRWFELS VARRLGVDSA AGQGGGASRY VALARDITAR RDAEAAMHRM AYYDALTGLP
NRRLLFEQLQ DALDQARSGG RIGALFFIDL DNFKQLNDAR GHAAGDRLLV QVARRLERLL
QGFGSVVRIG GDEFVVLIPR IANGMQAGVD AAGAMAARLR EGMEAPYDLG STYYSVTAST
GVTLFPKAGE TVEDLLREAD TAMYRAKSSG AHRVRFFEAD MQAAAQERLS LEQDLAQAIA
DDALEIHIHP QVDRDGAVCG GELLLRWRHP AHGNVSPARF VAIAEESGLI LRLGARVIRR
ACDALAQLHA AGLDMTISVN VSARQFRQED FVAYVRDALA YSGAPASRLI LEVTETLLVE
NWQDTARRMA ELVRFGVRFS IDDFGTGYSS LAYLKRLPLY ELKIDRSFVQ DAPVNPNDAA
IVRAILSMAQ HLRLRVVAEG VETETQAEFL ARHGCDAMQG YLYAHPLPLK EWIDTQVGAA
AV
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