| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2483 |
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| Symbol | |
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| ID | 4665577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2716470 |
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| End bp | 2717633 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639823688 |
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| Product | twitching motility protein |
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| Protein accession | YP_970832 |
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| Protein GI | 120611154 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0708894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.285122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TGGAGCGGAT TCTCCGGCTG ATGGCCGAGA AGCGGGCCTC GGACGTCTAT
CTCTCGGCCA ACGCCCCGGT CCTCATCAAG ATCAACGGCG AGTGCGTGCC CGTCAACAGC
CAGTTGCTGC CGTTCGATGC GCCGAAGAAT CTGCTGGCCG AGATCGTGCC GCCGGACCGC
ATCGAGGAGC TGGAGGAGAC GGGCGAGCTC AACATGGGCG TGCCGCTCAC GGGCGTGGGC
CGCTTCCGCG TGAGTGCCAT GCGCCAGCGC GGCAGCTACG CGGTGGTGGT GCGGTTCATC
GCGCAGCACA TCCCGGAGCT GCCCAGCCTC AACCTGCCGC CCATCCTCGG GGAGCTGATT
CTCGAAAAAC GCGGCCTGCT GCTGGTCGTG GGGGCGACGG GCTCGGGCAA GAGCACCACG
CTGGCCTCGA TGATCGACAG CCGCAACGCG CAGCTCACGG GACACATCCT CACGGTGGAA
GACCCGGTCG AGTACCAGTT CAAGAACAAG AAATCGATCG TCAACCAGCG CGAGATCGGC
TCCGACACCC AGTCCCTGCA GACGGCGCTG AAGAACGCGC TGCGGCAGGC GCCCGACGTG
ATCCTGATCG GCGAGATCCG CGACCGCGAG ACCATGTCCG CCGCCATCGC GTACGCGCAG
TCGGGCCACC TGTGCCTCGC CACCCTGCAC GGCAACAACA GCTACCACGC GCTGAACCGG
ATCCTCAGCT TCTACCCGGT GGAAGTGCGC CCCACCATGC TGGGCGACCT GGCCTCCGCC
CTGAAGGCCA TCGTCTCGCA GCGCCTCGTG CGTTCCCCCA CCGGCGAGCG CCTGCCCGCG
GTGGAAGTGC TGCTCAACAC CAAGCTCGTG GGCGAGATGA TCGAGCAGGG CAACTTCTCC
GGCGTGCGCG AGGCCATGGA AAAATCCATG GCCGAGGGCT CGCAGACCTT CGAGCACGAC
CTGGCACGCC TGGTCGTCGA AGGCCGCATC GACCGCAAGG AAGGCCTGGC CTACGCGGAT
TCGCCCACCA ACCTGATGTG GCGCCTGCAG AACGACTTCT CGATCGCCGC CAAGGCCGCC
CGCGACCGCA AGGACGCGGG CGCACAGGAC GACGAAGACC AGCCCTCGTT CACCGAGATC
GTCCTGGACG TCAAGCCCCA GTGA
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| Protein sequence | MSTMERILRL MAEKRASDVY LSANAPVLIK INGECVPVNS QLLPFDAPKN LLAEIVPPDR
IEELEETGEL NMGVPLTGVG RFRVSAMRQR GSYAVVVRFI AQHIPELPSL NLPPILGELI
LEKRGLLLVV GATGSGKSTT LASMIDSRNA QLTGHILTVE DPVEYQFKNK KSIVNQREIG
SDTQSLQTAL KNALRQAPDV ILIGEIRDRE TMSAAIAYAQ SGHLCLATLH GNNSYHALNR
ILSFYPVEVR PTMLGDLASA LKAIVSQRLV RSPTGERLPA VEVLLNTKLV GEMIEQGNFS
GVREAMEKSM AEGSQTFEHD LARLVVEGRI DRKEGLAYAD SPTNLMWRLQ NDFSIAAKAA
RDRKDAGAQD DEDQPSFTEI VLDVKPQ
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