| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2477 |
|---|
| Symbol | |
|---|
| ID | 4666324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2707843 |
|---|
| End bp | 2709555 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639823682 |
|---|
| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| Protein accession | YP_970826 |
|---|
| Protein GI | 120611148 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTG ACGCAGGCTG GGCCGGCAGC GCCCGGCAGA TCCAGCAGAA ACTGAGCGAA
AGCTGGATGC AGGCGCTGGA GGCCTTCCGG CAGGCCGGTG GTTCCGCCGC CCCGGATGCC
GGTGCCGCGC AGGCCCGTCC GGCCATCACC TTTTCTCCGG ACAAGCTCGC CAGCCTGCAG
CAGCAGTACG TGAAGGAGGC ATCGGAGCTC TGGAGCCAGG CGCTCCAGCC GACCACCATG
AAGGACCGCC GGTTCAGCGC CCCCGCATGG GCCGAAAGCC CCATGGCGGC CTTCGCCGCC
GCGTCCTACC TGCTCAATGC CCGCACCCTG ATGGGGCTGG CCGACGCGGT GGAGACCGAC
CCCAAGACGC GTGCGCGCAT CCGCTTCGGC GTGGAGCAGT GGATGGCTGC CATGGCGCCC
AGCAATTTCC TCGTCTTCAA CCCCGAGGCG CAGAAGAAGG CCATCGATTC CCAGGGCGAG
AGCCTGGCCA AGGGCATCGC CAACCTGCTG CACGACATGC GGCAGGGCCA CGTGTCCATG
ACCGACGAAA GCGTCTTCGA GGTGGGCCGC AACGTGGCCA CCTCCGAGGG CGCCGTGGTG
TACGAGAACG CGCTCTTACA GCTCATCGAG TACAAGCCGC TCACGCCCAA GGTGCACCAG
CGCCCGCTGC TGGTGGTGCC GCCCTGCATC AACAAGTTCT ACATCCTCGA CCTGCAGCCC
GAGAATTCGC TCATCCGGCA TGCGGTGTCC GAAGGGCATC GCACTTTCGT GGTGAGCTGG
CGCAACCCGG ACCAGTCCCT GGCGAACGCC ACCTGGGACG ACTACATCGA GGACGCGGTG
CTCCGTGCCA TCGACACCGT CCGCGAAATC TCTGGCAGCG ACCAGATCAA CGCGCTCGGC
TTCTGCGTGG GCGGCACCAT GCTGGCCACC GGCCTGGCCT TGTTGGCAGC CCGGGGCGAG
GAGCCCGTGG CCAGCGCCAC CTTCCTCACC ACGTTCATCG ATTTCGCCGA AACCGGCATC
CTCGATGTCT TCATCGACGA GAGCTTCGTG CATTTCCGCG AACTGCAGAT GGGGCAGGGC
GGCCTGATGA AGGGGCAGGA CCTCGCCTCC ACGTTCAGCT TCCTGCGGCC CAACGACCTC
GTCTGGACTT ACGTGGTGGG CAACTACCTG AAGGGCGAGA CGCCGCCTCC CTTCGACCTG
CTCTACTGGA ACAGCGATTC GACCAACCTG CCCGGGCCGT TCTACGCCTG GTACCTGCGC
AACCTCTACC TCGAGAACAA CCTCTGCAAG CCCGGCCGCC TGACCGTGTG CGGCGAGCCG
ATCGACCTGA ACCTCGTGGA CCTGCCCGCG TACATCTACG GCTCGCGCGA GGACCACATC
GTCCCGGTCG ATGCCGCGTA CGCGTCCACC CAGGTGCTGC CCGGCGACAA GCGCTTCGTG
ATGGGGGCCT CCGGCCACAT CGCGGGCGTC ATCAATCCCC CCGCCAAGAA GAAGCGCAGC
CACTGGATCC GCGAGGACGG CGTTCTGCCC GCCACGCTGC CCGAATGGCT GGACGGTGCG
ACGGAACTCC CCGGCAGCTG GTGGACCGAC TGGGCCGCCT GGCTGCGCGG CCATGCCGGC
CCGCTCGTGG CCGCGCCCAA GCGCTACGGC AAGGGCGCGC GGTTCCAGGC CATCGAGCCG
GCACCGGGAC GCTATGTGCG CGAGCGGGCC TGA
|
|---|
| Protein sequence | MDFDAGWAGS ARQIQQKLSE SWMQALEAFR QAGGSAAPDA GAAQARPAIT FSPDKLASLQ
QQYVKEASEL WSQALQPTTM KDRRFSAPAW AESPMAAFAA ASYLLNARTL MGLADAVETD
PKTRARIRFG VEQWMAAMAP SNFLVFNPEA QKKAIDSQGE SLAKGIANLL HDMRQGHVSM
TDESVFEVGR NVATSEGAVV YENALLQLIE YKPLTPKVHQ RPLLVVPPCI NKFYILDLQP
ENSLIRHAVS EGHRTFVVSW RNPDQSLANA TWDDYIEDAV LRAIDTVREI SGSDQINALG
FCVGGTMLAT GLALLAARGE EPVASATFLT TFIDFAETGI LDVFIDESFV HFRELQMGQG
GLMKGQDLAS TFSFLRPNDL VWTYVVGNYL KGETPPPFDL LYWNSDSTNL PGPFYAWYLR
NLYLENNLCK PGRLTVCGEP IDLNLVDLPA YIYGSREDHI VPVDAAYAST QVLPGDKRFV
MGASGHIAGV INPPAKKKRS HWIREDGVLP ATLPEWLDGA TELPGSWWTD WAAWLRGHAG
PLVAAPKRYG KGARFQAIEP APGRYVRERA
|
|---|
| |